Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_E08
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 135 2e-32
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 135 2e-32
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 63 1e-10
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 63 1e-10
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 62 2e-10
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 61 4e-10
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 57 7e-09
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 56 9e-09
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 55 3e-08
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 52 2e-07
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 43 1e-04
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 43 1e-04
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 43 1e-04
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 42 2e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 38 0.003
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 38 0.004
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 36 0.013
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 33 0.071
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 32 0.16
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 30 0.87
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.0
U53146-1|AAA96111.1| 348|Caenorhabditis elegans Hypothetical pr... 28 3.5
AC024696-1|AAK84516.1| 348|Caenorhabditis elegans Hypothetical ... 28 3.5
Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z92849-14|CAE17857.1| 359|Caenorhabditis elegans Hypothetical p... 27 8.1
Z78414-4|CAE17982.1| 359|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 135 bits (326), Expect = 2e-32
Identities = 56/72 (77%), Positives = 67/72 (93%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
M+TP+RRRLMRDFK+LQEDPP GVSGAPT++NI+ W A+IFGP +TPFEDGTFKL++EFT
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 408 EEYPNKPATVRF 443
EEYPNKP TV+F
Sbjct: 61 EEYPNKPPTVKF 72
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 135 bits (326), Expect = 2e-32
Identities = 56/72 (77%), Positives = 67/72 (93%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
M+TP+RRRLMRDFK+LQEDPP GVSGAPT++NI+ W A+IFGP +TPFEDGTFKL++EFT
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 408 EEYPNKPATVRF 443
EEYPNKP TV+F
Sbjct: 61 EEYPNKPPTVKF 72
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +3
Query: 240 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 419
A +R+ ++ + L DPP S P +++ W A I GP ++P++ G F LTI F +YP
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 420 NKPATVRF 443
KP V F
Sbjct: 62 FKPPKVAF 69
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +3
Query: 240 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 419
A +R+ ++ + L DPP S P +++ W A I GP ++P++ G F LTI F +YP
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 420 NKPATVRF 443
KP V F
Sbjct: 62 FKPPKVAF 69
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTGVSGAPTD-NNIMIWNAVIFGPHDTPFEDGTFKLTIEF 404
M+ A +RLM ++K L PP G+ AP D +N W +I GP +T F +G F I F
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITF 60
Query: 405 TEEYPNKPATVRF 443
++YP P +RF
Sbjct: 61 PQDYPLSPPKMRF 73
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 60.9 bits (141), Expect = 4e-10
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = +3
Query: 246 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 425
RR++++ +RL DP G+S P ++N ++ +I GP D+PF G FKL + EEYP
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 426 PATVRF 443
VRF
Sbjct: 67 APKVRF 72
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 56.8 bits (131), Expect = 7e-09
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
+ST A +RL +D++RL ++P + AP + NI+ W +I G TP+E G + + F
Sbjct: 5 VSTVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFP 64
Query: 408 EEYPNKPATV 437
+++P KP +
Sbjct: 65 KDFPFKPPAI 74
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 56.4 bits (130), Expect = 9e-09
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +3
Query: 231 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 410
S+ A RRL +D+ +L +DP G+ P ++NI+ W+ + G DTPF G + + F E
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKE 76
Query: 411 EYPNKPATV 437
+P P +
Sbjct: 77 NFPWSPPAI 85
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +3
Query: 231 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 410
S+ A R L + K LQ P G + ++N+ +W I+GP T ++ G FK +I F
Sbjct: 8 SSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPS 67
Query: 411 EYPNKPATVRF 443
YP P +++F
Sbjct: 68 NYPYSPPSMKF 78
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 51.6 bits (118), Expect = 2e-07
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 222 IKMSTPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 398
++ S+ ++ + D +R+ P G S G DN+I W ++ GP DT +E G FK +
Sbjct: 1 MEQSSLLLKKQLADMRRV---PVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAIL 57
Query: 399 EFTEEYPNKPATVRF 443
+F +YP KP ++F
Sbjct: 58 DFPRDYPQKPPKMKF 72
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTG-VS-GAPTDNNIMI--WNAVIFGPHDTPFEDGTFKLT 395
+ P RL+ + + Q+ G +S G D+++ + W A I GP TP+E + L
Sbjct: 2 VDVPRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQ 61
Query: 396 IEFTEEYPNKPATVRF 443
I+ YP +P TVRF
Sbjct: 62 IQCGGNYPREPPTVRF 77
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 225 KMSTPARRRLMRDFKRL---QEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLT 395
KMS A R+ R K + + G+ +NN+M I GP TP+ GTF++
Sbjct: 14 KMSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIK 73
Query: 396 IEFTEEYPNKPATV 437
++ E YP +P V
Sbjct: 74 VDIPEHYPFEPPKV 87
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRL---QEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 398
MS A RL R+ K + E TG+ + N+ I GP DTP+ G F L I
Sbjct: 1 MSNIAFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDI 60
Query: 399 EFTEEYPNKPATVRF 443
+ ++YP P V+F
Sbjct: 61 KIPDQYPFSPPNVKF 75
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 240 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 398
A +R+ ++ L DPP S +++ W A I GP ++P++ G F LTI
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTG--VSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 401
MS A RRLM++ +L+ + P G V T N++ W + G T + F L
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFT 60
Query: 402 FTEEYPNKPATVRF 443
F +YP V F
Sbjct: 61 FGPQYPFNSPEVMF 74
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 37.9 bits (84), Expect = 0.003
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 345 IFGPHDTPFEDGTFKLTIEFTEEYPNKPATVRF 443
I GP DTP+E G F++ + F + YPN ++F
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKF 67
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 37.5 bits (83), Expect = 0.004
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 342 VIFGPHDTPFEDGTFKLTIEFTEEYPNKPATVRF 443
+I G +TP+E G F+L I+ E YP K TV+F
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKF 417
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 315 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPATVRF 443
+ N++ W ++ P P+ G FK+ I F +YP KP V F
Sbjct: 29 ETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAF 70
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 33.5 bits (73), Expect = 0.071
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 315 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPATVRF 443
+ + I +I GP DTP+ +G F+ I F YP P F
Sbjct: 439 EGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAF 481
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 32.3 bits (70), Expect = 0.16
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 351 GPHDTPFEDGTFKLTIEFTEEYPNKPATVRF 443
GP DT +E+G +++ ++ ++YP K ++ F
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGF 71
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 29.9 bits (64), Expect = 0.87
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 252 LMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPN 422
L +F + P G+ +P+ NN +W VIF F G F+ I E+P+
Sbjct: 24 LAAEFVEVCRAPIDGIFVSPSANNKFLWFGVIF-VRKGIFGGGIFRFNIHIPLEFPD 79
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +3
Query: 219 EIKMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 398
E+ S+ R R K ++ P+G G NN+ W +V D F DG + I
Sbjct: 60 ELLTSSENRDGTKRVVKHIRSLEPSGYEGGNEGNNLEAWQSV-QSNQDGVFPDGYDGINI 118
Query: 399 EFTEEYPNKPA 431
YP P+
Sbjct: 119 IRNFMYPPPPS 129
>U53146-1|AAA96111.1| 348|Caenorhabditis elegans Hypothetical
protein ZC411.1 protein.
Length = 348
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 254 DERFQTFTRRPTNRCVW 304
+ER TF PTNRC+W
Sbjct: 186 EERRLTFRFTPTNRCIW 202
>AC024696-1|AAK84516.1| 348|Caenorhabditis elegans Hypothetical
protein F07B7.7 protein.
Length = 348
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 254 DERFQTFTRRPTNRCVW 304
+ER TF PTNRC+W
Sbjct: 186 EERRLTFRFTPTNRCIW 202
>Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical
protein T05C12.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 4.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 391 NLNVPSSNGVSWGPNITAFQI 329
N +PS N +S+ PN+T F +
Sbjct: 403 NAEIPSDNSLSYNPNLTYFSL 423
>Z92849-14|CAE17857.1| 359|Caenorhabditis elegans Hypothetical
protein H12D21.11 protein.
Length = 359
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/40 (25%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -3
Query: 115 TQF--LWIVSLSLCKKIVVTISEMVCQMTMKLTIHNLALV 2
TQF L +VS+ + +++ + ++C +T +T+H ++++
Sbjct: 114 TQFCVLNLVSVIVAMVLLIVVENLMCYLTTIMTLHAISMI 153
>Z78414-4|CAE17982.1| 359|Caenorhabditis elegans Hypothetical
protein H12D21.11 protein.
Length = 359
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/40 (25%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -3
Query: 115 TQF--LWIVSLSLCKKIVVTISEMVCQMTMKLTIHNLALV 2
TQF L +VS+ + +++ + ++C +T +T+H ++++
Sbjct: 114 TQFCVLNLVSVIVAMVLLIVVENLMCYLTTIMTLHAISMI 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,990,514
Number of Sequences: 27780
Number of extensions: 201571
Number of successful extensions: 494
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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