Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_E08
         (444 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    28   0.040
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   4.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   4.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.1  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 0.040
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -3

Query: 130 ISLLYTQFLWIVSLSLCKKIVVTISEMVCQMTMKLTI 20
           +SL + Q+ W++ +SLC KI   +SEM   +++ LTI
Sbjct: 98  LSLFWQQYPWVLGVSLC-KIRAYVSEMSSYVSV-LTI 132


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 57  LIVTTIFLHNDKETIHKNC 113
           L++T IFL+  +  I K+C
Sbjct: 11  LVITLIFLYFGEADIKKDC 29


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 377 IFKWSIMGPKYHSIP 333
           I  W+  GP+ H +P
Sbjct: 317 IINWNFRGPRTHRMP 331


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 400 SIVNLNVPSSNGVSW 356
           S VN  VP+ N V W
Sbjct: 498 SFVNNGVPNVNSVQW 512


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 400 SIVNLNVPSSNGVSW 356
           S VN  VP+ N V W
Sbjct: 498 SFVNNGVPNVNSVQW 512


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,799
Number of Sequences: 438
Number of extensions: 2498
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)