Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_E07
(448 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 165 1e-41
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 165 1e-41
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 165 1e-41
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 111 3e-25
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 31 0.29
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 31 0.29
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 31 0.29
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 31 0.29
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 31 0.29
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 31 0.29
Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical ... 29 2.0
AF016430-10|AAB65374.1| 467|Caenorhabditis elegans Hypothetical... 29 2.0
AF025452-5|AAK71872.1| 336|Caenorhabditis elegans Serpentine re... 27 4.7
AF022978-9|AAG24185.1| 353|Caenorhabditis elegans Seven tm rece... 27 4.7
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical... 27 4.7
U58762-4|AAK39303.1| 109|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 165 bits (402), Expect = 1e-41
Identities = 70/104 (67%), Positives = 88/104 (84%)
Frame = +1
Query: 136 DDAVEERVINEEYKIWEKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLIL 315
D E+RV N+EYKIW+KNTPFLYDLVMTHALEWPSL+ QWLPDV + + D+++HRLIL
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLIL 64
Query: 316 GTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGTGSVS 447
GTHTSDEQNHLLI+ + +P +DAQFDAS YD ++ E+GG G+V+
Sbjct: 65 GTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVN 108
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 165 bits (402), Expect = 1e-41
Identities = 70/104 (67%), Positives = 88/104 (84%)
Frame = +1
Query: 136 DDAVEERVINEEYKIWEKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLIL 315
D E+RV N+EYKIW+KNTPFLYDLVMTHALEWPSL+ QWLPDV + + D+++HRLIL
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLIL 64
Query: 316 GTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGTGSVS 447
GTHTSDEQNHLLI+ + +P +DAQFDAS YD ++ E+GG G+V+
Sbjct: 65 GTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVN 108
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 165 bits (402), Expect = 1e-41
Identities = 70/104 (67%), Positives = 88/104 (84%)
Frame = +1
Query: 136 DDAVEERVINEEYKIWEKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLIL 315
D E+RV N+EYKIW+KNTPFLYDLVMTHALEWPSL+ QWLPDV + + D+++HRLIL
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLIL 64
Query: 316 GTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGTGSVS 447
GTHTSDEQNHLLI+ + +P +DAQFDAS YD ++ E+GG G+V+
Sbjct: 65 GTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVN 108
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 111 bits (266), Expect = 3e-25
Identities = 46/96 (47%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = +1
Query: 163 NEEYKIWEKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLILGTHT-SDEQ 339
++E++IW+KN P+LYD V+T +EWPSL+ QW+PDVT+ E D S+HR+I GTHT Q
Sbjct: 11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQ 70
Query: 340 NHLLIASVQLPNEDAQFDASHYDNDKGEFGGTGSVS 447
NHL+I+ + + +FD + +D+++ EFGG G S
Sbjct: 71 NHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGS 106
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 5 EDFVWRLYGAGQKSG---IRTIIFHLCFSYI 88
EDFVW+++ G+K G I TI F C+S I
Sbjct: 510 EDFVWKIFSPGKKLGGLVIFTIAFICCYSAI 540
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 5 EDFVWRLYGAGQKSG---IRTIIFHLCFSYI 88
EDFVW+++ G+K G I TI F C+S I
Sbjct: 510 EDFVWKIFSPGKKLGGLVIFTIAFICCYSAI 540
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 5 EDFVWRLYGAGQKSG---IRTIIFHLCFSYI 88
EDFVW+++ G+K G I TI F C+S I
Sbjct: 568 EDFVWKIFSPGKKLGGLVIFTIAFICCYSAI 598
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 5 EDFVWRLYGAGQKSG---IRTIIFHLCFSYI 88
EDFVW+++ G+K G I TI F C+S I
Sbjct: 568 EDFVWKIFSPGKKLGGLVIFTIAFICCYSAI 598
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 5 EDFVWRLYGAGQKSG---IRTIIFHLCFSYI 88
EDFVW+++ G+K G I TI F C+S I
Sbjct: 614 EDFVWKIFSPGKKLGGLVIFTIAFICCYSAI 644
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 5 EDFVWRLYGAGQKSG---IRTIIFHLCFSYI 88
EDFVW+++ G+K G I TI F C+S I
Sbjct: 540 EDFVWKIFSPGKKLGGLVIFTIAFICCYSAI 570
>Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical
protein F20D1.2 protein.
Length = 641
Score = 30.7 bits (66), Expect = 0.50
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 241 SLTAQWLPDVTRPEGKDYSVHRLILGTHTSDEQNHL 348
+ T +++P TRP+ + + + RL+L H NHL
Sbjct: 135 AFTTKYIPKDTRPDAQIFDLFRLLLQYHDPQISNHL 170
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 187 KNTPFLYDLVMTHALEWPSLTAQWLPDVTRP 279
K P D + H +EW L +W+ D RP
Sbjct: 606 KTIPATKDELFVHRIEWDQLDGKWMNDRIRP 636
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 187 KNTPFLYDLVMTHALEWPSLTAQWLPDVTRP 279
K P D + H +EW L +W+ D RP
Sbjct: 606 KTIPATKDELFVHRIEWDQLDGKWMNDRIRP 636
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 187 KNTPFLYDLVMTHALEWPSLTAQWLPDVTRP 279
K P D + H +EW L +W+ D RP
Sbjct: 448 KTIPATKDELFVHRIEWDQLDGKWMNDRIRP 478
>AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical
protein B0546.3 protein.
Length = 468
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 198 WSILFPYFILFIDYSFFYRVVECFSVAFITHFMV 97
W ++P+F +F +S FY F + F+ F+V
Sbjct: 377 WEKIYPFFRIFRFFSNFYTFPVVFEIDFLPIFLV 410
>AF016430-10|AAB65374.1| 467|Caenorhabditis elegans Hypothetical
protein C05C8.7 protein.
Length = 467
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 265 DVTRPEGKDYSVHRLILGTHTSDEQ 339
D+ P+ KD+ +HR+ +GTH + E+
Sbjct: 336 DMYAPDCKDFQLHRIRVGTHQTVEE 360
>AF025452-5|AAK71872.1| 336|Caenorhabditis elegans Serpentine
receptor, class i protein29 protein.
Length = 336
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 59 IIFHLCFSYIY*QTIKWVIKATEK 130
II+HLC SY T+ W T K
Sbjct: 140 IIYHLCMSYSLAITLAWYFSETSK 163
>AF022978-9|AAG24185.1| 353|Caenorhabditis elegans Seven tm
receptor protein 256 protein.
Length = 353
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 139 DAVEERVINEEYKIWEKNTPFLYDLVMTHALEWP 240
D +R +NE Y+ +NT L DL L WP
Sbjct: 154 DPQTDRFLNENYQEISENTTSLEDLYYVGPLFWP 187
>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
protein C02E7.1 protein.
Length = 1050
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +1
Query: 220 THALEWPSLTAQWLPDVTRPEGKDYSVHRLILGTHTSDEQNHLLIASVQLPNE 378
+++ +W +T LP +T+ + + HR I+ T+ E +++ Q E
Sbjct: 686 SNSQDWAVITGSELPALTQKQWDELLQHRYIVFARTTPEHKLMIVTESQKRGE 738
>U58762-4|AAK39303.1| 109|Caenorhabditis elegans Hypothetical
protein T27F7.3b protein.
Length = 109
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 279 RPGNVREPLSSKRGPFQGVCHHQIVQ 202
RP + E L ++ G QGVCH +I Q
Sbjct: 8 RPADAFEQLETEDGVRQGVCHIRIQQ 33
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 311 YSELTLQMNKITY*LLVYNCQMKMLNLMQVIMTMIRESLVVLVPY 445
YS+ LQ ++Y L YN ++K LNL + ++ L++L +
Sbjct: 276 YSQKVLQKFNVSYSL--YNDRLKSLNLHSIRHRRLKSKLILLYKF 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,172,682
Number of Sequences: 27780
Number of extensions: 205975
Number of successful extensions: 610
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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