Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_E05
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022083-1|AAY33499.1|  531|Drosophila melanogaster RH39704p pro...    30   2.3  
AY089497-1|AAL90235.1|  531|Drosophila melanogaster GH09868p pro...    30   2.3  
AE013599-3707|AAF47080.2|  332|Drosophila melanogaster CG10327-P...    30   2.3  
AE013599-3706|AAM68274.1|  531|Drosophila melanogaster CG10327-P...    30   2.3  
AE013599-3705|AAF47078.2|  531|Drosophila melanogaster CG10327-P...    30   2.3  
AE013599-3704|AAF47079.2|  531|Drosophila melanogaster CG10327-P...    30   2.3  
AB019707-1|BAA34430.1|  332|Drosophila melanogaster TAR-binding ...    30   2.3  
AB019706-1|BAA34429.1|  531|Drosophila melanogaster TAR-binding ...    30   2.3  
AB019705-1|BAA34428.1|  531|Drosophila melanogaster TAR-binding ...    30   2.3  
AB010261-8|BAA34422.1|  332|Drosophila melanogaster TAR-binding ...    30   2.3  
AB010261-7|BAA34421.1|  531|Drosophila melanogaster TAR-binding ...    30   2.3  
AE014296-2461|AAF49677.1|  137|Drosophila melanogaster CG13461-P...    28   7.2  

>BT022083-1|AAY33499.1|  531|Drosophila melanogaster RH39704p
           protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AY089497-1|AAL90235.1|  531|Drosophila melanogaster GH09868p
           protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AE013599-3707|AAF47080.2|  332|Drosophila melanogaster CG10327-PA,
           isoform A protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AE013599-3706|AAM68274.1|  531|Drosophila melanogaster CG10327-PD,
           isoform D protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AE013599-3705|AAF47078.2|  531|Drosophila melanogaster CG10327-PC,
           isoform C protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AE013599-3704|AAF47079.2|  531|Drosophila melanogaster CG10327-PB,
           isoform B protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AB019707-1|BAA34430.1|  332|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AB019706-1|BAA34429.1|  531|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AB019705-1|BAA34428.1|  531|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AB010261-8|BAA34422.1|  332|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AB010261-7|BAA34421.1|  531|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  WKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGF 168
           WKT  + ++ + + YG    A+ +KDT   + +GF
Sbjct: 116 WKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150


>AE014296-2461|AAF49677.1|  137|Drosophila melanogaster CG13461-PA
           protein.
          Length = 137

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 25  LAANQWAGDKRWSWKTENDFVKRFNDAYGNTDAAKAEKDTDEVKDEGFV 171
           L A + A D+  S +   +     ND  GN+DAA+ E   +E +D G V
Sbjct: 17  LVAARPAEDEESSIQDNTNEDSSSNDGEGNSDAAEEEPAVEESQDSGNV 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,459,718
Number of Sequences: 53049
Number of extensions: 379045
Number of successful extensions: 1035
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)