Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_E02
         (391 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              25   0.41 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   0.94 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   1.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.0  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    20   8.7  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 0.41
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 330 EPFRAPELLSQPSMMG 377
           E FR PE L QPS +G
Sbjct: 28  ERFRCPEALFQPSFLG 43


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 0.94
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 118 NVCDYCRDWPPPVMISERKIP 180
           + CD+ RD   P+++  R+ P
Sbjct: 188 DTCDFTRDKVAPILVRARETP 208


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
 Frame = -1

Query: 160 SSPAAASLDSNRIRSAAAAG------DGCGPSPRG---EHVAPRGETSP 41
           +SPA ASL+S+   +A AA           PSP G   +H      TSP
Sbjct: 32  TSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSP 80


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 376 PIMEG*DNSSGALKGSIARC 317
           P  EG +  S   KGSIARC
Sbjct: 196 PNDEGIETDSDRRKGSIARC 215


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 252 PSTAHHLPPSQSPPHDLYFCKRPNRNLAFRNHH 154
           PSTA  LPPS  P         P+R  +  + H
Sbjct: 306 PSTAGFLPPSYHPHQHHPSQYHPHRGSSPHHQH 338


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -1

Query: 160 SSPAAASLDSNRIRSAAAAGDGCGPSPRGEHVAPRGETSPLYT 32
           S+PA  +         AA+  G GP+     VA    T+ + T
Sbjct: 214 STPATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAMTT 256


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 175 SCVPKSSPAAASLDSNRIRSAAAAGDGCGPS 83
           SC P ++ AAA L   R  S  + G     S
Sbjct: 155 SCGPGAAAAAALLSKRRSVSECSLGTASSTS 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,798
Number of Sequences: 438
Number of extensions: 2252
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)