Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D22
(344 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 150 3e-37
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 149 8e-37
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 33 0.045
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 33 0.045
01_06_1453 - 37465665-37466627 31 0.32
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 29 0.98
01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416 29 1.3
11_05_0010 - 18356835-18357080,18357475-18357672,18357780-183580... 28 1.7
04_04_0864 - 28852252-28854582 28 1.7
04_03_0266 + 13648287-13649099,13649186-13649524 28 1.7
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 2.3
08_02_0630 - 19483485-19483671,19483761-19484179,19485180-194854... 28 2.3
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 28 2.3
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 28 2.3
01_01_0826 + 6431621-6431917,6432356-6432505,6432614-6432796,643... 28 2.3
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 27 3.0
10_08_0781 + 20509033-20509714,20510048-20510191,20510604-205107... 27 3.0
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 27 3.0
02_05_0521 - 29726985-29727605 27 3.0
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 27 3.0
11_06_0711 - 26508228-26508488,26508970-26509084,26509179-265094... 27 3.9
09_04_0254 + 16131779-16132475,16132609-16132768,16132944-161329... 27 5.2
07_03_1439 - 26556398-26556418,26556700-26557743 27 5.2
11_05_0007 - 18324969-18325063,18326580-18326745,18327078-183272... 26 6.9
02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212 26 6.9
11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016... 26 9.1
11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439,347... 26 9.1
07_01_0075 - 558829-560859 26 9.1
06_03_0569 + 22361917-22362291 26 9.1
06_01_0668 - 4882174-4884204 26 9.1
03_05_0708 - 27028243-27028336,27028853-27029238 26 9.1
01_01_0591 - 4401847-4402063,4402860-4403002,4403339-4403447,440... 26 9.1
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 150 bits (363), Expect = 3e-37
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 197 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 301
+R R+ EA++KGRH G+GKRRGT AR+P K LW
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILW 95
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 149 bits (360), Expect = 8e-37
Identities = 65/95 (68%), Positives = 80/95 (84%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 197 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 301
+R R+ EA++KGRH G+GKRRGT AR+P K LW
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILW 95
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 33.5 bits (73), Expect = 0.045
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 32 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 202
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 203 VRKNTEARRKGRHCGFG 253
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 33.5 bits (73), Expect = 0.045
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 32 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 202
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 203 VRKNTEARRKGRHCGFG 253
+ T RKGR GFG
Sbjct: 757 DEETTSISRKGRAQGFG 773
>01_06_1453 - 37465665-37466627
Length = 320
Score = 30.7 bits (66), Expect = 0.32
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 286 WHSSISCTSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHL---TDVLSGISI 116
W S S P + AT T+ + LC A+ A + F DQ+ D L TDV S+
Sbjct: 206 WSSPASGNDPTSTAT-TATTSMLCTDASVQAALGELNFAMDQSCFDSLGLPTDVAGAGSL 264
Query: 115 SDFIDLV 95
S + +V
Sbjct: 265 SSWCSIV 271
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 29.1 bits (62), Expect = 0.98
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 INEIANTNSRQNIRKMIKDGLVIK-KPVAVHSRARVRKNTEARRKGRHCGFGKRRGTAN 274
+ E N NS + + GL+ + KP+ V S RVR + K GK R TAN
Sbjct: 198 LGEANNDNSEKLEELFLDKGLLDELKPIRVESGKRVRASIRIIEKMMSSRVGKIRNTAN 256
>01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416
Length = 302
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 158 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTA 271
G+ +K+ H + + R+GRH G+G+RR +A
Sbjct: 212 GITLKEDEKQHGTSSSAADGGGLRRGRHDGWGRRRSSA 249
>11_05_0010 -
18356835-18357080,18357475-18357672,18357780-18358046,
18358870-18359067,18359151-18359417,18359524-18359724,
18359807-18361363,18361499-18361859,18362602-18363467
Length = 1386
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -2
Query: 259 PLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKP 83
P KA ++S LC + S+W ++ I+D + DVL I ID +W KP
Sbjct: 248 PNVKAVLSSI---LCQVSQLKYENFSSW--GEKEIIDKIRDVLKDIRYFIIIDDIWDKP 301
>04_04_0864 - 28852252-28854582
Length = 776
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 343 YLSSSLTEHPLPLNP*FFLWHSSISCTSPLTKATVTSFPARLCVFAN 203
YL T+H P+ F +S+++C + A+ ++PA VFA+
Sbjct: 639 YLEFLCTQHMTPMQLRTFTKNSNMTCRHTFSSASDLNYPAISVVFAD 685
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 71 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 217
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 86 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 190
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>08_02_0630 -
19483485-19483671,19483761-19484179,19485180-19485413,
19485714-19485851
Length = 325
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 192 PALVFAKTQRRAGKDVTVALVRGEV 266
P LVF KT G V VAL+ G+V
Sbjct: 70 PVLVFPKTSTDGGSSVIVALLPGDV 94
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 152 KDGLVIKKPVAVHSRARVRKNTEARRKGRHC---GFGKRRGTANAR 280
KDG ++ + +RA R +T+A R+ HC G+G RR + R
Sbjct: 174 KDGRNLQAGAQLCARAASRGHTDALRELGHCVSDGYGVRRSLSGGR 219
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
+ SL L R+ C +V+ D + N +NIRK + ++++ P+A +
Sbjct: 103 IESLSLMIRMLL-YCECFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 197 ARVRKNTEARRK 232
NT RK
Sbjct: 162 IENSPNTVTVRK 173
>01_01_0826 +
6431621-6431917,6432356-6432505,6432614-6432796,
6433305-6433385,6433548-6433586,6433646-6433849,
6433933-6434073,6434270-6434437,6434498-6434518
Length = 427
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 219 RRAGKDVTVALVRGEVQLMLECHKKN 296
RRAG +VTVA V ++Q++ HK N
Sbjct: 272 RRAGANVTVASVEDKLQVVTRRHKFN 297
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 41 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMIKDGLV 166
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>10_08_0781 +
20509033-20509714,20510048-20510191,20510604-20510719,
20511356-20511520,20511822-20512043,20512613-20512735
Length = 483
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 83 WLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 256
++D N+ + + +SR ++ ++ GL +K PV + VR E GR G G+
Sbjct: 29 YVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVR---ELYTLGRELGQGQ 83
>10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -2
Query: 256 LTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIK 86
+ +A+ L + S G+ F + I DHL + +G + I +VWI+
Sbjct: 1264 IIRASTVHDEKTLLRYVRQSPGVTEPCFSRGRVITDHLLKISNGAQRWELISMVWIE 1320
>02_05_0521 - 29726985-29727605
Length = 206
Score = 27.5 bits (58), Expect = 3.0
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 128 RQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRK-GRHCGFGKRRGTANARM-PQKELW 301
R +R M++ GL + +AV A R + EARR+ R +RRG A + P W
Sbjct: 54 RAAVRGMVRGGLAPRARLAVLRAAAFRDSREARRRIRRDRRRRRRRGMMVAALSPNHAFW 113
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.5 bits (58), Expect = 3.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 71 KKKVWLDPN-EINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRK 232
K KVW P E+ + +R + +K + +KP A R RVRK TEA K
Sbjct: 681 KPKVWSRPRKEVEPVGKPKARGHPKKQAEPD---EKPKA---RGRVRKTTEANGK 729
>11_06_0711 -
26508228-26508488,26508970-26509084,26509179-26509451,
26509629-26510197,26510489-26510597,26511002-26511544,
26511645-26511763,26511893-26512120,26512199-26512315,
26512410-26512506,26513169-26513569
Length = 943
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -2
Query: 157 ILDHLTDVLSGISISDFIDLVWIKPHLFFTASH 59
+L H L + S + L W+KP F+ SH
Sbjct: 490 LLKHAKGSLISVGWSVILPLSWVKPFWFYLVSH 522
>09_04_0254 +
16131779-16132475,16132609-16132768,16132944-16132992,
16133158-16133271,16133434-16133958,16135538-16135969,
16138882-16138956,16139530-16139625,16140610-16140725,
16140822-16140992,16141080-16141239,16141328-16141513,
16141624-16141752,16141837-16141915,16142034-16142143
Length = 1032
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 197 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 301
AR + + +++GR G+G R+ A R+ +E W
Sbjct: 396 ARGGQQQQQQQEGRRGGWGVRKAAARVRVAAEENW 430
>07_03_1439 - 26556398-26556418,26556700-26557743
Length = 354
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 8 GARMSSLKLQKRLAASVMRCGKKKVWLDPNEIN 106
G R SL++ + LAA+ +R G+ + L PN ++
Sbjct: 66 GLRALSLRVARALAAAGLRRGRVALLLSPNSLH 98
>11_05_0007 -
18324969-18325063,18326580-18326745,18327078-18327275,
18327377-18327643,18328070-18328129,18328767-18329033,
18329156-18329359,18329441-18331496,18332517-18333358
Length = 1384
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 220 LCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKP 83
LC + S+W ++ I+D + D+L I ID +W KP
Sbjct: 250 LCQVSQLKYENFSSW--GEKEIIDKIRDILKDIRYFIIIDDIWDKP 293
>02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212
Length = 297
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 137 IRKMIKDGLVIKKPVAVHSRA 199
+RK I +GLV+ P AVH R+
Sbjct: 277 LRKQITEGLVMASPHAVHFRS 297
>11_06_0093 +
19999503-20000231,20000308-20000742,20000829-20001670,
20001748-20001916
Length = 724
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 86 LDPNEINEIANTNSRQNIRKMIKDGLVIKK 175
LDP +NE N R NI IKD L ++
Sbjct: 685 LDPAVVNETTLKNDRANIVAYIKDCLFARQ 714
>11_01_0449 -
3473662-3475049,3476026-3476128,3476215-3476439,
3476689-3476856,3477414-3477529,3477640-3477792,
3477879-3478022,3478980-3479583
Length = 966
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 300 HSSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRA 196
H+ + +L PLLLP P+ R L AS R A
Sbjct: 563 HAFASALLSLPFPLLLPHPRNRLLLAASELARAAA 597
>07_01_0075 - 558829-560859
Length = 676
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 199 SAGMDSNWFL-DDQTILDHLTDVLSGISISDFID 101
SA + ++ L DD+ D L ++L G +++DF+D
Sbjct: 429 SASLKKHYLLADDEWKEDILPEILDGHNVADFLD 462
>06_03_0569 + 22361917-22362291
Length = 124
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 177 QLLSIPALVFAKTQRRAG 230
QLL PALV + QRRAG
Sbjct: 17 QLLQQPALVVVRPQRRAG 34
>06_01_0668 - 4882174-4884204
Length = 676
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 199 SAGMDSNWFL-DDQTILDHLTDVLSGISISDFID 101
SA + ++ L DD+ D L ++L G +++DF+D
Sbjct: 429 SASLKKHYLLADDEWKEDILPEILDGHNVADFLD 462
>03_05_0708 - 27028243-27028336,27028853-27029238
Length = 159
Score = 25.8 bits (54), Expect = 9.1
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -2
Query: 280 SSISCTSPLTKATV--TSFPARLCVFANTSAGMDSNWFLDD 164
S+I+ PL A + +S + LC+ +TSA D ++FL D
Sbjct: 45 STITRGGPLLLAGLACSSAASSLCLVHDTSASTDDDYFLSD 85
>01_01_0591 -
4401847-4402063,4402860-4403002,4403339-4403447,
4403546-4404707,4405754-4405865,4405980-4406015
Length = 592
Score = 25.8 bits (54), Expect = 9.1
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = -2
Query: 280 SSISCTSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFID 101
S S + + V + P RL + +A D+ +DD +L +S SD +
Sbjct: 204 SLFSSPAESEQQNVAATPRRLTRLNHFTAAADAAAAMDDSGDEHQQRTLLKTLSRSDRVG 263
Query: 100 LVWIKPHLFFTASH 59
L W + L A H
Sbjct: 264 LAWPEQPLDLLAKH 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,674,419
Number of Sequences: 37544
Number of extensions: 181710
Number of successful extensions: 603
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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