Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_D22
         (344 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   3.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   4.1  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   5.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   7.2  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     20   9.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   9.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   9.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   9.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   9.5  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 13  QDEFPKVTEEACSLC 57
           +DEF +  +  CSLC
Sbjct: 263 EDEFDEFGDSKCSLC 277


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 135 FCLELVLAISLISFGSSHTFFLPHRITEAASL 40
           + + L+L   LISF     F+LP    E  +L
Sbjct: 236 YTVNLILPTVLISFLCVLVFYLPAEAGEKVTL 267


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 264 VQLMLECHKKNYGFKGK 314
           VQL +EC  K + F  K
Sbjct: 59  VQLYIECAMKKFSFVDK 75


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 192 EWTATGFLMTRPSLIILRMFCLELVLAISL 103
           +W     ++ R  LII  +F +   +A+ L
Sbjct: 518 DWKFAAMVIDRMCLIIFTLFTIIATIAVLL 547


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +2

Query: 155 DGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQK 292
           +GL+    V   S A  R      RK     FG+ + T  + +P +
Sbjct: 221 EGLLPPVWVGGESEALARLERHLERKAWVASFGRPKMTPQSLLPSQ 266


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 149 IKDGLVIKKPVAVH 190
           +KDG+V+   + VH
Sbjct: 286 VKDGIVLATGITVH 299


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 160 SGHQETSCCPFPRSCSQKHRG 222
           +G   +  CP PRS   K  G
Sbjct: 374 NGQTHSQLCPTPRSTHLKVSG 394


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 149 IKDGLVIKKPVAVH 190
           +KDG+V+   + VH
Sbjct: 286 VKDGIVLATGITVH 299


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -2

Query: 214 VFANTSAGMDSNWFLDDQTI 155
           V+     GM+  WF   +T+
Sbjct: 383 VYNGDEIGMEDRWFTYQETV 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,041
Number of Sequences: 438
Number of extensions: 1617
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)