Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D21
(557 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 296 1e-80
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 296 1e-80
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 296 1e-80
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 291 6e-79
AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p pro... 29 4.3
AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-P... 29 4.3
AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC... 28 7.4
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 7.4
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 296 bits (727), Expect = 1e-80
Identities = 134/168 (79%), Positives = 150/168 (89%)
Frame = +2
Query: 53 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 232
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 233 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 412
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 413 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVHVDISTNK 556
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI+ NDSV VDI++ K
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 296 bits (727), Expect = 1e-80
Identities = 134/168 (79%), Positives = 150/168 (89%)
Frame = +2
Query: 53 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 232
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 233 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 412
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 413 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVHVDISTNK 556
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI+ NDSV VDI++ K
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 296 bits (727), Expect = 1e-80
Identities = 134/168 (79%), Positives = 150/168 (89%)
Frame = +2
Query: 53 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 232
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 233 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 412
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 413 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVHVDISTNK 556
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI+ NDSV VDI++ K
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 291 bits (713), Expect = 6e-79
Identities = 132/168 (78%), Positives = 148/168 (88%)
Frame = +2
Query: 53 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 232
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 233 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 412
V KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 413 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVHVDISTNK 556
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI+ NDSV VDI++ K
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
>AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p
protein.
Length = 707
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -2
Query: 427 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 248
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 328 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 387
Query: 247 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 122
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 388 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 429
>AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-PB,
isoform B protein.
Length = 714
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -2
Query: 427 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 248
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 335 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 394
Query: 247 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 122
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 395 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 436
>AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC,
isoform C protein.
Length = 945
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 424 QGAARRDRPQERAVPGDARRAHAPVPGPAH 513
+G+ RR Q+R PG P P PAH
Sbjct: 581 RGSPRRKDAQDRTTPGTEPHTTNPNPAPAH 610
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 98 KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 268
++W L + AP P G + E +R ++ ++TG E++++VKQ KV
Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62
Query: 269 -DGKVRTDPTYP 301
+ KV PT P
Sbjct: 63 EEEKVEIPPTEP 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,921,573
Number of Sequences: 53049
Number of extensions: 575666
Number of successful extensions: 1617
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -