Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D20
(436 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 38 5e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 37 0.002
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 36 0.002
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 33 0.019
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 29 0.41
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 28 0.54
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 28 0.71
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 28 0.71
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 27 1.2
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 27 1.6
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 2.2
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 26 2.9
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 3.8
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 25 3.8
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 25 5.0
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 25 5.0
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.7
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 25 6.7
SPAPB17E12.11 |||N-oligosaccharyltransferase gamma subunit |Schi... 24 8.8
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 24 8.8
SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr... 24 8.8
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 24 8.8
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 24 8.8
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 24 8.8
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 38.3 bits (85), Expect = 5e-04
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Frame = +1
Query: 61 CENVLTKFRYLVSHMHLH--YRNYICSVCDAGFITQSSLFTHSSCHKTG--EFTCDFCTS 228
C T+ L SHM+ H YR + CS+C F Q H H TG F C C
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH-TGIKAFACVTCNQ 635
Query: 229 VF------NTYMKKKTHERCVHT 279
F N + K + + C+ T
Sbjct: 636 RFARMDALNRHYKSEVGQNCLRT 658
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 36.7 bits (81), Expect = 0.002
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 61 CENVLTKFRYLVSHM--HLHYRNYICSVCDAGFITQSSLFTHSSCHKTGE-FTCDFCTSV 231
C + + + SH+ HL R Y C +C AGF+ L H H+ G + C+ C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 232 FNTYMKKKTHER 267
FN H++
Sbjct: 509 FNRLDALNRHKQ 520
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 36.3 bits (80), Expect = 0.002
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +1
Query: 124 YICSVCDAGFITQSSLFTHSSCHKTGE--FTCDF--CTSVFNTYMKKKTHER 267
Y C+ C GF SSL H+ H TGE F CD+ C FN + H+R
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSH-TGERPFVCDYAGCGKAFNVRSNMRRHQR 518
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 33.1 bits (72), Expect = 0.019
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Frame = +1
Query: 52 CDVCENVLTKFRYLVSHMHLHYRNYICSV--CDAGFITQSSLFTH-SSCH-KTGEFTCDF 219
CD C + + R +S H H Y C+ C+ F T+ L H + H K ++C
Sbjct: 120 CDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPH 179
Query: 220 CTSVFNTYMKKKTHERCVHTHGSVLNKCAYCEETFRD--YRMKEVHLTKAHGISQPTHKC 393
+ V + +K + + H + + C+ C F+ + V L + + T+ C
Sbjct: 180 ESCVGHEGFEKWSQLQ-NHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHC 238
Query: 394 EM--CDKTYTTRKAM 432
M C K++T A+
Sbjct: 239 PMEGCKKSFTRSSAL 253
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 28.7 bits (61), Expect = 0.41
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -2
Query: 240 RIEDTRAEVTSEFSSLMAGRVSKERALRY--EPSVTNTADIIPIMQVHMTNQVTKLCQHI 67
R E R ++ SE S R +R EP ++A + P + VHM + VT+ Q +
Sbjct: 30 RDEALRKKIISELGKKSGNFESPVRKIRRNGEPGTVDSAALDPALTVHMQSLVTETAQLM 89
Query: 66 LA 61
A
Sbjct: 90 AA 91
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 28.3 bits (60), Expect = 0.54
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +1
Query: 205 FTCDFCTSVFNTYMKKKTHERCVHTHGSVLNKCAYCEETFRDYRMKEVHLTKAH 366
F CD C F + H+ C H+ + C YCE + + + H+ + H
Sbjct: 31 FPCDQCAKRFTRHENLTRHKAC-HSKAEPI-PCPYCEIKCKRKDLLKRHIQRFH 82
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 27.9 bits (59), Expect = 0.71
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 133 SVCDAGFITQSSLFTHSSCHKTGEFTCDFCTSVFNTYMKKK 255
++C A F+ S + H+ H DFC S +TY+K K
Sbjct: 65 NICLASFLYLSKCYYHT--HILTSVRLDFCKSHAHTYIKSK 103
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 27.9 bits (59), Expect = 0.71
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +1
Query: 46 MQCDVCENVLTKFRYLVSHMHLHYRNYICSVCDAGFITQSSLFTH--SSCHKTGEFTCDF 219
++C C VL YLVSH NY + C F+ + G F C
Sbjct: 232 LRCKKCRFVLASSDYLVSHEPKDENNYSHTRCTHYFLEPIRWMQPELELGNLEGRFDCPK 291
Query: 220 CTSVFNTY 243
C S +Y
Sbjct: 292 CNSKIGSY 299
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 27.1 bits (57), Expect = 1.2
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 148 GFITQSSLFTHSSCHKTGEFTCDFCTSVFNTYMKKKTH--ERCVHTHGSVLNKCAYCEET 321
G+I ++S F H + T D T+ N + + K H + V + +VL+K T
Sbjct: 883 GYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRT 942
Query: 322 FRDYRM 339
+++
Sbjct: 943 TECWKL 948
>SPAC806.08c |mod21||gamma tubulin complex subunit
Mod21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 618
Score = 26.6 bits (56), Expect = 1.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 365 WAFVRCTSFIL*SRNVSSQYAHLFK 291
W FV+ FI +RN SSQ L+K
Sbjct: 323 WDFVKTLEFIYSTRNYSSQMFKLYK 347
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.2 bits (55), Expect = 2.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Frame = +1
Query: 127 ICSVCDAGFITQSSLF--THSSCH----------KTGEFTCDFCTSVFNTYMKKKTHERC 270
IC +C G IT S + H CH KT E C FC + ++T + K HE
Sbjct: 80 ICFICAEG-ITYSCVLPCNHRMCHVCALRLRALYKTKE--CTFCKTEWDTVLITKDHEID 136
Query: 271 VH 276
+H
Sbjct: 137 IH 138
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1207
Score = 25.8 bits (54), Expect = 2.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 106 HLHYRNYICSVCDAGFITQ 162
H Y N +C+VCD G I Q
Sbjct: 1180 HKGYVNEVCTVCDVGGIGQ 1198
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.4 bits (53), Expect = 3.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 334 RMKEVHLTKAHGISQPTH 387
R K + + K HGIS P H
Sbjct: 338 RRKSISIVKPHGISSPKH 355
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 3.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 265 RCVHTHGSVLNKCAYCEETFRDYRMKEVHLTKAHGISQPTHKCEMCDKT 411
R V + SVL + C+ D ++E H PT+K E + T
Sbjct: 117 RVVKPYNSVLGEFFRCKWVVTDPTVREDHTLDPDSSQLPTYKTEYSETT 165
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 25.0 bits (52), Expect = 5.0
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +1
Query: 205 FTCDFCTSVFNTYMKKKTHERCVHTHGSVLN--KCAYCEETFRDYRMKEVH 351
F C C F+ +KT++ C+ C E +RD+ + + H
Sbjct: 139 FQCILCEDWFHEKCLQKTNKGIAIPDAETFEWLVCSECSEKYRDHLLNQKH 189
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 25.0 bits (52), Expect = 5.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 154 ITQSSLFTHSS-CHKTGEFTCDFCTSVFNTYMKKKTHE-RCVH 276
I + L HSS F C +CT F + K + HE C H
Sbjct: 402 IDDADLVFHSSPLLSRSRFICCYCTKPFLSISKLQEHESSCSH 444
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 24.6 bits (51), Expect = 6.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 109 LHYRNYICSVCDAGFITQSSLFTHSSCHKTGE 204
L +N CS+ F + + + H+ CH+ E
Sbjct: 1680 LPQQNEKCSIYPLAFSPRFTYYRHTKCHRRNE 1711
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 24.6 bits (51), Expect = 6.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 109 LHYRNYICSVCDAGFITQSSLF--THSSCH 192
+H Y CSVCD I +S L +HS+ H
Sbjct: 143 IHNVRYKCSVCDDYDICESCLTDNSHSNTH 172
>SPAPB17E12.11 |||N-oligosaccharyltransferase gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 24.2 bits (50), Expect = 8.8
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 34 ENGMMQCDVCENVLTKFRYLVSHMHLHY 117
++ M CDVC + +F+ L + L Y
Sbjct: 59 DSSTMNCDVCRLIEPEFKALANSYKLKY 86
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 24.2 bits (50), Expect = 8.8
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 107 TCIIGIISAVFVTLGS*RRALSLLTRPAIRLENS 208
+C++ IISA F+TL ++++T I L++S
Sbjct: 458 SCLLFIISAYFLTLWLMSLVIAVVTSSFIDLQHS 491
>SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 24.2 bits (50), Expect = 8.8
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 103 MHLHYRNYICSVCDAGFITQSSLFTHSSCHKTG 201
+HL R Y+C+ C + L +H K G
Sbjct: 7 VHLKSRCYVCAKCKTHLAFKGHLLSHDYRGKNG 39
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 24.2 bits (50), Expect = 8.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 343 EVHLTKAHGISQPTHKCEMCDKTYTTRKAMM 435
E+ L H + PT+K E+ D+T R M
Sbjct: 790 EISLRSVHFLPFPTYKSELDDETVLRRVKRM 820
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 24.2 bits (50), Expect = 8.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 372 NSMGFRQMHLFHPIITECLLAIRAFVQDASMSVD-ASLVG 256
N+ F +LF +IT C+ A+ F+ S + + A+L+G
Sbjct: 538 NARSFFIFYLFTIVITFCMSAVFRFIALLSTTAEIAALIG 577
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 24.2 bits (50), Expect = 8.8
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Frame = +1
Query: 205 FTCDFCTSVFNTYMKKKTHERCVHTHGSVLNKCAYCEETFRD-YRMKEVHLTKAHGISQP 381
F C CT FN +K H + H ++ K A + + K + + K + Q
Sbjct: 5 FACTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAEVFAGKILSIQKQNEEVQK 64
Query: 382 T----HKCEMCDKTYTTRKA 429
CE+C+K + + A
Sbjct: 65 KAEFYQNCEVCNKKFYSEGA 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,850,417
Number of Sequences: 5004
Number of extensions: 37816
Number of successful extensions: 157
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 156095170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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