Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D18
(411 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p pro... 89 2e-18
AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-P... 89 2e-18
AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-P... 51 5e-07
AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-P... 33 0.11
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 30 1.0
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 30 1.0
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 30 1.0
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 30 1.0
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 30 1.0
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 30 1.0
BT030286-1|ABN49425.1| 649|Drosophila melanogaster IP18554p pro... 27 7.3
AE014298-2531|ABI30988.1| 1520|Drosophila melanogaster CG5055-PB... 27 9.7
>AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p
protein.
Length = 262
Score = 89.4 bits (212), Expect = 2e-18
Identities = 45/100 (45%), Positives = 60/100 (60%)
Frame = +2
Query: 110 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 289
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 290 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCIL 409
K+ YPT+ ++ R +FS+H R TR NLTPGTV IL
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLIL 122
>AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-PB,
isoform B protein.
Length = 262
Score = 89.4 bits (212), Expect = 2e-18
Identities = 45/100 (45%), Positives = 60/100 (60%)
Frame = +2
Query: 110 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 289
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 290 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCIL 409
K+ YPT+ ++ R +FS+H R TR NLTPGTV IL
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLIL 122
>AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-PA,
isoform A protein.
Length = 243
Score = 51.2 bits (117), Expect = 5e-07
Identities = 35/100 (35%), Positives = 53/100 (53%)
Frame = +2
Query: 110 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 289
N L G+LR+SK++MY ++A+Y+ + VV++ V +K
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIK 63
Query: 290 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCIL 409
K+ YPT+ ++ R +FS+H R TR NLTPGTV IL
Sbjct: 64 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLIL 103
>AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-PB,
isoform B protein.
Length = 1346
Score = 33.5 bits (73), Expect = 0.11
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 78 VSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYI-SLSVRRTRKLKSPRNQPSWLSK*AV 254
+S S AN+ I S T S SP+AG L I SL +R+ + + P +SK V
Sbjct: 1104 ISESPNAANKVIEASPTAASPSPRAGHEASHLRIRSLRIRKVASTSTSQTTPKPVSKRKV 1163
Query: 255 KRMEALVQSC*KAGNHSTPLRTRS 326
+E +++ K +P + S
Sbjct: 1164 VHLETPLRNGRKRVLRRSPSNSNS 1187
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 36 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 215
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3666 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3724
Query: 216 --PRNQ 227
PRNQ
Sbjct: 3725 YQPRNQ 3730
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 36 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 215
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 216 --PRNQ 227
PRNQ
Sbjct: 3731 YQPRNQ 3736
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 36 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 215
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3615 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3673
Query: 216 --PRNQ 227
PRNQ
Sbjct: 3674 YQPRNQ 3679
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 36 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 215
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3615 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3673
Query: 216 --PRNQ 227
PRNQ
Sbjct: 3674 YQPRNQ 3679
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 36 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 215
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 216 --PRNQ 227
PRNQ
Sbjct: 3731 YQPRNQ 3736
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 36 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 215
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 216 --PRNQ 227
PRNQ
Sbjct: 3731 YQPRNQ 3736
>BT030286-1|ABN49425.1| 649|Drosophila melanogaster IP18554p
protein.
Length = 649
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 30 HHSPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPK 149
+HS +PP+P P SRS L E+ + +P+
Sbjct: 532 NHSASGSHSPPKPMPRTSRSNSLPEASDSAGESSSTNTPR 571
>AE014298-2531|ABI30988.1| 1520|Drosophila melanogaster CG5055-PB,
isoform B protein.
Length = 1520
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 262 WRHSYSPAEKQEIILPHSGQDQGSFS 339
WRH+Y A KQE I PH GQ S+S
Sbjct: 21 WRHTYKVAAKQEGI-PH-GQLHKSYS 44
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,213,525
Number of Sequences: 53049
Number of extensions: 399694
Number of successful extensions: 1134
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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