Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D17
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 52 6e-08
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 52 6e-08
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 45 1e-05
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 42 6e-05
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 41 2e-04
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 39 6e-04
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 35 0.012
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 35 0.012
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 34 0.021
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 31 0.15
SPAC105.02c |||ankyrin repeat protein, unknown biological role|S... 28 1.1
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 28 1.4
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 4.3
SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyc... 26 5.7
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 25 7.5
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 25 9.9
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 52.4 bits (120), Expect = 6e-08
Identities = 32/106 (30%), Positives = 50/106 (47%)
Frame = +3
Query: 273 SIFDAIGQEDFAEFTSILTQHKGGVNFFDENGMTALQHAAYKGNKDMVQLLLDRGANVNA 452
S+F A Q + ++++ K VN DE G TAL AA + + LL+ GA+VNA
Sbjct: 3 SLFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNA 62
Query: 453 GKHEYNYTALHFGALSGSSEVCKLLLDAGAEPTATNSVGRTASQMA 590
+ +H+ A GS + L+ GA+P + G +A
Sbjct: 63 IGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLA 108
Score = 38.7 bits (86), Expect = 8e-04
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +3
Query: 345 VNFFDENGMTALQHAAYKGNKDMVQLLLDRGANVNAGKHEYNYTALHFGALSGSSEVCKL 524
V+ D+ T L A+Y GN+ + LL GA+V A E T LH+ + G+ + KL
Sbjct: 127 VDLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLA-TDEDKMTPLHWSIVGGNLKCMKL 185
Query: 525 LLDAGAEP 548
+L G P
Sbjct: 186 ILKEGGIP 193
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 52.4 bits (120), Expect = 6e-08
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 357 DENGMTALQHAAYKGNKDMVQLLLDR-GANVNAGKHEYNYTALHFGALSGSSEVCKLLLD 533
DENG + L A+ G+ +VQ ++ V ++E TA+H+ AL+G +E+CKLLL+
Sbjct: 33 DENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHAEICKLLLE 92
Query: 534 AGAEPTATN 560
AG +P N
Sbjct: 93 AGGDPHIKN 101
Score = 33.5 bits (73), Expect = 0.028
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +3
Query: 333 HKGGVNFFDENGMTALQHAAYKGNKDMVQLLLDRGANVNAGKHEYNYTALHFGALSGSSE 512
+K +N +E+G TA+ AA G+ ++ +LLL+ G + + K+ Y + ++ + +
Sbjct: 60 NKEVINAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHI-KNIYEKSPIYEADIRNQQK 118
Query: 513 VCKLLLD 533
V L LD
Sbjct: 119 VMDLFLD 125
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 44.8 bits (101), Expect = 1e-05
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = +3
Query: 348 NFFDENGMTALQHAAYKGNKDMVQLLLDRGANVNAGKHEYNYTALHFGALSGSSEVCKLL 527
N D + TAL A + V++LL GAN +A ++T L + +G SE+ +L
Sbjct: 361 NEVDASSNTALHTAVRYNRPECVKMLLKLGANPSARDFLNSWTPLMLASATGLSEIVSIL 420
Query: 528 LDAGAEPTATNSVGRTASQMAAFVGNHH 611
+ +GA +S G TA + A G H
Sbjct: 421 VASGASVDEVDSSGWTAMEQAVVRGYLH 448
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 42.3 bits (95), Expect = 6e-05
Identities = 25/90 (27%), Positives = 41/90 (45%)
Frame = +3
Query: 303 FAEFTSILTQHKGGVNFFDENGMTALQHAAYKGNKDMVQLLLDRGANVNAGKHEYNYTAL 482
FA T T + + +E+G + L A G + L + G +VN + YT L
Sbjct: 841 FALVTDTTTPYLSDFSLVNESGRSLLHLTAACGLSNASTFLCNAGCDVNK-RDALGYTPL 899
Query: 483 HFGALSGSSEVCKLLLDAGAEPTATNSVGR 572
H+ +L ++C LL GA+P + G+
Sbjct: 900 HYASLYDHKDICVNLLSNGAKPDVIGASGK 929
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 40.7 bits (91), Expect = 2e-04
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 357 DENGMTALQHAAYKGNKDMVQLLLDRGANVNAGKHEYNYTALHFGALSGSSEVCKLLLDA 536
D G T L AA G +V+ L+ + A +N Y +T LHF G +V L+ A
Sbjct: 138 DLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSD-SYGFTPLHFALAEGHPDVGVELVRA 196
Query: 537 GAEPTATNSVGRTASQM 587
GA+ +S TA ++
Sbjct: 197 GADTLRKDSENHTALEV 213
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 39.1 bits (87), Expect = 6e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 441 NVNAGKHEYNYTALHFGALSGSSEVCKLLLDAGAEPTATNSVGRTA 578
+VNAG E +TALH+ A G+ E+ LL AGA A N + +T+
Sbjct: 228 DVNAGIDEDGHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTS 273
Score = 35.1 bits (77), Expect = 0.009
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +3
Query: 357 DENGMTALQHAAYKGNKDMVQLLLDRGANVNA 452
DE+G TAL AA GN +M+ LL GANV A
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANVVA 265
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 34.7 bits (76), Expect = 0.012
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +3
Query: 315 TSILTQH-KGGV--NFFDENGMTALQHAAYKGNKDMVQLLLDRGANVN 449
T ++ +H G+ N DENG T + A G+ D++++L++RG ++N
Sbjct: 17 TDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDIN 64
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 34.7 bits (76), Expect = 0.012
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 270 RSIFDAIGQEDFAEFTSILTQHKGGVNFF---DENGMTALQHAAYKGNKDMVQLLLDR 434
R++ E+ F L QHKG ++ F +E+G TAL A Y GN + LLL +
Sbjct: 53 RTVLHIAVSENKNSFVRSLLQHKG-IDVFVQDEESGYTALHRAIYVGNLEAASLLLSK 109
Score = 33.5 bits (73), Expect = 0.028
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 345 VNFFDENGMTALQHAAYKGNKDMVQLLLD-RGANVNAGKHEYNYTALHFGALSGSSEVCK 521
+N D G T L A + V+ LL +G +V E YTALH G+ E
Sbjct: 45 INQKDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAAS 104
Query: 522 LLL 530
LLL
Sbjct: 105 LLL 107
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 345 VNFFDENGMTALQHAAYKGNKDMVQLLLDRGAN 443
+N D+NG TAL AA GNK++V++L+ GA+
Sbjct: 477 LNHQDKNGDTALNIAARIGNKNIVEVLMQAGAS 509
Score = 29.9 bits (64), Expect = 0.35
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 474 TALHFGALSGSSEVCKLLLDAGAEPTATNSVGRTASQMAAFVGN 605
TAL+ A G+ + ++L+ AGA N G + + FV N
Sbjct: 486 TALNIAARIGNKNIVEVLMQAGASAYIPNRAGLSVANFGIFVEN 529
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 31.1 bits (67), Expect = 0.15
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 444 VNAGKHEYNYTALHFGALSGSSEVCKLLLDAGAEPTATNSVGRTASQMAAFVGNHHTVAT 623
VN+ + +T+LH+ G E+ KLLL A A+ N + +T + N++ T
Sbjct: 240 VNSVIDDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPLMRSVIFTNNYDCQT 299
Query: 624 INNYIPREEIAYYS 665
+ + Y+
Sbjct: 300 FGQVLELLQSTIYA 313
>SPAC105.02c |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 170
Score = 28.3 bits (60), Expect = 1.1
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 12/114 (10%)
Frame = +3
Query: 264 PERSIFDAIGQEDFAEFTSILTQHKG-GVNFF----DENGMTALQHAAYKGNKDMVQLLL 428
P + A + ++ Q +G GV+F D G + G+ + + LL
Sbjct: 8 PSEMLIAACRSNNVDMLEEVVHQQEGDGVSFINNARDSLGNDCVHVCTKYGSLECLDWLL 67
Query: 429 D-RGANVNAGKHEYNYTALHFGAL------SGSSEVCKLLLDAGAEPTATNSVG 569
D G N+N T LHF + + + ++L++ GA+P TN+ G
Sbjct: 68 DISGVNLNNRCRMTGDTPLHFAVMFIKKDQETALRMVEMLMEVGADPLLTNNDG 121
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 459 HEYNYTALHFGALSGSSEVCKLLLDAGAEPTATNSVGRTASQMA 590
H + T LH+ ++++ LL GA+P N G+T +++
Sbjct: 430 HLHTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEIS 473
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 474 TALHFGALSGSSEVCKLLLDAGAEPTATNSVGR 572
T LH + +E+ K LLD GA+P + G+
Sbjct: 191 TYLHVATKAKDAELVKWLLDNGADPYRRDKFGK 223
>SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 615
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 489 GALSGSSEVCKLLLDAGAEPTATNSVGRTASQMAAFVGNHHTVATINNYIPREEI 653
GAL G+++ DAG P A R A+++ +G H + + NN R E+
Sbjct: 457 GALDGAAQEFSKAYDAGLSPRAFVDSCRKANKLIPGIG--HRIKSRNNPDLRVEL 509
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 177 LKLPTFNFGKNLIFF 133
LK+P F+F KN +FF
Sbjct: 845 LKMPNFDFKKNQVFF 859
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 365 IFVKKINATLMLSQYTRELCKVFLTNSVKDR 273
+F+KKI A + ++ E+CK +++ D+
Sbjct: 421 LFLKKIRAAFLNGKFQSEVCKPLSIDNIIDQ 451
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,400,283
Number of Sequences: 5004
Number of extensions: 43147
Number of successful extensions: 124
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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