Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D16
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435... 179 2e-45
09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306... 36 0.024
11_01_0189 - 1493618-1493637,1493728-1493795,1494070-1494207,149... 36 0.032
03_02_0036 + 5182345-5183511 32 0.30
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 32 0.39
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38... 32 0.39
10_01_0329 - 3599571-3600554 29 3.6
10_01_0322 + 3516922-3517899 29 3.6
04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727 29 3.6
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 29 3.6
10_01_0320 + 3506183-3507109 28 4.8
06_03_0357 - 19830555-19831178 28 4.8
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 28 6.3
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 28 6.3
02_05_1079 + 33950290-33950337,33950418-33952586,33952690-339527... 28 6.3
01_06_0646 - 30832201-30832838,30833643-30833838,30833975-308341... 28 6.3
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 27 8.4
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 27 8.4
>10_08_0985 -
22042801-22042963,22043019-22043138,22043261-22043562,
22044055-22044351,22044448-22044556,22044826-22045358,
22045446-22045644,22045741-22045865,22045937-22046020,
22046093-22046221,22046337-22046465,22046593-22046739,
22047106-22047346,22047859-22047980
Length = 899
Score = 179 bits (435), Expect = 2e-45
Identities = 88/200 (44%), Positives = 126/200 (63%), Gaps = 6/200 (3%)
Frame = +1
Query: 7 GKDVPARVTLLELPNRTEIRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKNDIKY 186
G + PARV+L+++P + E+R KNLFSV+DCK++WQ SG+YL V+VDRY+K KK
Sbjct: 386 GGNQPARVSLVQIPGKEELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKK------- 438
Query: 187 SGMYYNFEIFHMREKEIPVDSVEI---KEPIQAFAWEPVGSKFAIIHGDPANISISFYQV 357
Y FE+F ++E++IP++ +E+ + I AFAWEP G +FA+IHGD ISFY +
Sbjct: 439 -STYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSM 497
Query: 358 NTGQAPTLRKK---FERKPFNHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTIMNVCDH 528
T + K + K N LFWSP G+FIV A L G LEF + ++ M +H
Sbjct: 498 KTSNNISRVSKLTTLKGKQANALFWSPGGRFIVFAGLKGFNGQLEFYNVDELETMATGEH 557
Query: 529 YQMSGIEWDPTGRYVVTGVS 588
+ + I WDPTGRY+ + V+
Sbjct: 558 FMATDIMWDPTGRYLASAVT 577
>09_02_0022 +
3065644-3065953,3066048-3067162,3067261-3067437,
3067535-3067648,3068614-3068718,3068930-3069064,
3069148-3069203,3069277-3069382,3069515-3069631,
3069705-3069831,3069915-3070141,3070164-3070727
Length = 1050
Score = 35.9 bits (79), Expect = 0.024
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 409 NHLFWSPSGQFIVLANLGLTGGALEF-LDTNDFTIMNVCDHYQ-MSGIEWDPTGRYVVT 579
N L WSP GQF LA GL + + DT + +H Q + + W P GRY+VT
Sbjct: 210 NALCWSPDGQF--LAVPGLRNNVVMYDRDTGEEVFTLKGEHEQPVCSLCWSPNGRYLVT 266
Score = 33.9 bits (74), Expect = 0.097
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 274 AFAWEPVGSKFAIIHGDPANISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQFIVLA 453
A W P G +F + G N+ + Y +TG+ K +P L WSP+G+++V A
Sbjct: 211 ALCWSPDG-QFLAVPGLRNNVVM--YDRDTGEEVFTLKGEHEQPVCSLCWSPNGRYLVTA 267
Query: 454 NL 459
L
Sbjct: 268 GL 269
>11_01_0189 -
1493618-1493637,1493728-1493795,1494070-1494207,
1494647-1494698,1494803-1494902,1495606-1495681,
1495757-1495844,1496248-1496342,1496506-1496605,
1496765-1496879,1497077-1497241,1497362-1497547
Length = 400
Score = 35.5 bits (78), Expect = 0.032
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 421 WSPSGQFIVLANLGLTGGALEFLDTNDFTIMN-VCDHYQMSGIEWDPTGRYVVTGVS 588
WSPSG +++ A L G +TN +T + +SG WDP GR V+ S
Sbjct: 238 WSPSGDYLLTAKLD---GTFHLWETNTWTSEPWSSSNGYVSGANWDPEGRIVLLSFS 291
>03_02_0036 + 5182345-5183511
Length = 388
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 512 IIVKSLVSKNSKAPPVRPKLASTMNCPEGDQNRWLNGFLSNF 387
+++ S+V+ APPV LA+ + P G +W++ L +
Sbjct: 243 VLICSVVAAAIAAPPVAAALAAAASIPVGSMGKWIDSLLKGY 284
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 512 IIVKSLVSKNSKAPPVRPKLASTMNCPEGDQNRWLNGFLSNF 387
++V S+V+ APPV LA+ + P G +W++ L +
Sbjct: 233 LLVCSVVAAAIAAPPVAAALAAAASMPVGSAGKWMDSLLKKY 274
>08_01_0058 +
388989-389102,389226-389337,389457-389483,389787-389859,
389958-390061,390144-390358,390429-390528,390739-390805,
391628-391716,391810-391948,392057-392157,392921-393088,
393302-393510
Length = 505
Score = 31.9 bits (69), Expect = 0.39
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Frame = +1
Query: 268 IQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQAPTLRKK--FERKPFNHLFWSPSGQF 441
+ + P G A I + + G+A ++K F K L WS G F
Sbjct: 67 VNVLRFSPSGENLASGADGGGIIIWKLHSTDDGEAWKVQKTLLFHHKDVLDLQWSQDGAF 126
Query: 442 IVLANLGLTGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVT 579
+V A++ + + + + + HY + G+ WDP G+Y+ +
Sbjct: 127 LVSASVDNSCIVWDAIKGSVQQKLEGHLHY-VQGVAWDPLGQYIAS 171
>10_01_0329 - 3599571-3600554
Length = 327
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 441 ELPRG*PEQMVERLPLELLAQSRRLPGVHLVEADRDVRRVTVDYSELRPDRFPS 280
ELPR PE+ V + +L+ ++++ H++ D + + +L+ F S
Sbjct: 138 ELPRARPEKQVRFMMRQLIGAAKKMHASHVIHRDIKPENILNSFGDLKVCDFGS 191
>10_01_0322 + 3516922-3517899
Length = 325
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 441 ELPRG*PEQMVERLPLELLAQSRRLPGVHLVEADRDVRRVTVDYSELRPDRFPS 280
ELPR PE+ V + +L+ ++++ H++ D + + +L+ F S
Sbjct: 136 ELPRARPEKQVRFMMRQLIGAAKKMHASHVIHRDIKPENILNSFGDLKVCDFGS 189
>04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727
Length = 706
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 250 VEIKEPIQAFAWEPVGSKFAIIHGDPANISISF 348
+E++ P+ + + P G+ F +IHG + ISF
Sbjct: 438 LEVEVPMLVYEFVPNGTLFELIHGKNQGLQISF 470
>02_05_0672 +
30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 109 QKSGDYLCVKVDRYSKVKKDKNDIKYSG 192
Q+ DYLC K+ R SK + DK K G
Sbjct: 491 QREVDYLCKKLQRASKQQTDKKTEKVEG 518
>10_01_0320 + 3506183-3507109
Length = 308
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 441 ELPRG*PEQMVERLPLELLAQSRRLPGVHLVEADRDVRRVTVDYSELRPDRFPS 280
ELPR PE+ V + +L+ ++++ H++ D + + +L+ F S
Sbjct: 119 ELPRARPEKQVRFMMRQLVGAAKKMHASHVIHRDIKPENILNSFGDLKVCDFGS 172
>06_03_0357 - 19830555-19831178
Length = 207
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 501 FHYYERLRPLPDVGHRMGSDWTLCGD 578
F Y+ R P +GH MG W + GD
Sbjct: 141 FEYWARAELPPAMGHDMGGGWCVDGD 166
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 331 NISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTI 510
+ ++ ++ + P R +K NH+++SP GQ++ A+ + + T F
Sbjct: 363 DFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWNGI-TGKFVA 421
Query: 511 M---NVCDHYQMSGIEWDPTGRYVVTG 582
+V D YQ+S W R +++G
Sbjct: 422 AFRGHVADVYQIS---WSADSRLLLSG 445
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 331 NISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTI 510
+ ++ ++ + P R +K NH+++SP GQ++ A+ + + T F
Sbjct: 312 DFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWNGI-TGKFVA 370
Query: 511 M---NVCDHYQMSGIEWDPTGRYVVTG 582
+V D YQ+S W R +++G
Sbjct: 371 AFRGHVADVYQIS---WSADSRLLLSG 394
>02_05_1079 +
33950290-33950337,33950418-33952586,33952690-33952780,
33952955-33953435,33954249-33954345
Length = 961
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -1
Query: 525 VADVHNSEIVSVQKLQSSTGETQVGEHYELPRG*PEQMVERLPLELLAQSRRLPGVH-LV 349
+ +VH V+K + T GE + + +G PEQ++E + A+ + VH L+
Sbjct: 394 IKEVHFLPFNPVEKRTAITYIDGNGEWHRISKGAPEQIIELCKMSKDAEKK----VHTLI 449
Query: 348 E--ADRDVRRVTVDYSEL 301
+ ADR +R + V Y ++
Sbjct: 450 DQYADRGLRSLGVSYQKV 467
>01_06_0646 -
30832201-30832838,30833643-30833838,30833975-30834126,
30834258-30834303,30834992-30835216,30835374-30835414,
30835705-30835834,30835951-30836019,30836254-30836307,
30836389-30836547,30836854-30836991,30837079-30837141,
30837225-30837264,30837369-30837415,30838062-30838373
Length = 769
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 325 PANISISFYQVNTGQAPT 378
PA +S+SFY VN G+ P+
Sbjct: 592 PAAVSMSFYDVNAGEQPS 609
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 71 RICSPWPIVRYTGRRVATICV 133
R C PWP+VR + R+ T+C+
Sbjct: 68 RSC-PWPVVRLSRARLVTLCL 87
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 290 GSQAKACMGSLISTESTGISFSLIWKISK 204
G +AK+C G +++ +STG S I + K
Sbjct: 143 GREAKSCAGGILADKSTGCSIRKITRSDK 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,405,492
Number of Sequences: 37544
Number of extensions: 382597
Number of successful extensions: 1157
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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