Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D16
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical... 112 2e-25
Z66496-3|CAA91279.2| 570|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 33 0.11
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical... 28 5.7
AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical... 28 5.7
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 27 9.9
M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL132877-14|CAD92388.1| 439|Caenorhabditis elegans Hypothetical... 27 9.9
AL132877-13|CAC70110.4| 478|Caenorhabditis elegans Hypothetical... 27 9.9
>AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical
protein Y54E2A.11a protein.
Length = 725
Score = 112 bits (270), Expect = 2e-25
Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 6/194 (3%)
Frame = +1
Query: 16 VPARVTLLELPNRTEIRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVK-KDKNDIKY-S 189
VPA LL++P+ +RS + +VAD ++ WQKSG L R+ K + ++ ++KY
Sbjct: 381 VPAEFGLLQVPSMQRLRSARVHNVADAQMFWQKSGKRLAFYTMRFKKKEYRETGEVKYVG 440
Query: 190 GMYYNFEIFHMREKEIPVDSVEIKEPIQAFAWEPVGSKFAIIHGDPANISISFYQVN-TG 366
G Y+ +IF + +K++ + ++ + EP F W+P G KF ++ G+ A + Y++
Sbjct: 441 GCQYHVDIFEIDKKDVSLMNLPLSEPFIHFDWDPEGDKFCVLVGNTAKATPQVYKIEANS 500
Query: 367 QAPTLRKKFER-KPFNHLFWSPSGQFIVLANLGLTGGALEFLDT--NDFTIMNVCDHYQM 537
AP L K + FN + ++P G ++ + GG + F+DT ++ NV +H
Sbjct: 501 HAPKLVSKLDAGVHFNEVQFAPKGGWLAVLAKVSAGGNVYFIDTSLSEAKRTNVIEHPLF 560
Query: 538 SGIEWDPTGRYVVT 579
+ WDPTGRY VT
Sbjct: 561 NKGYWDPTGRYFVT 574
>Z66496-3|CAA91279.2| 570|Caenorhabditis elegans Hypothetical
protein E04D5.1a protein.
Length = 570
Score = 49.6 bits (113), Expect = 2e-06
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Frame = +1
Query: 19 PARVTLLELPNRTEIRSKNLFSVADCKIH-WQKSGDYLCVKVDRYSKVKKDKNDIKYSGM 195
PARV + + + F +D + W + G L + + V+ DK + Y G
Sbjct: 200 PARVRVHRVSESFPVVGNRTFFKSDKAVMTWNQRGQSLLI----LASVEVDKTNQSYYGE 255
Query: 196 YYNFEIFHMREKEIPVDSVEIKEPIQAFAWEPVGSKFAIIHG-DPANISISFYQVNTGQA 372
+ + +++ E V +E K PI A W P G +FA+ +G PA ++FY N
Sbjct: 256 Q-SLYLINIQSGESVVVPLEKKGPIYAAKWNPNGREFAVCYGYMPA--KVTFY--NPRGV 310
Query: 373 PTLRKKFERKPFNHLFWSPSGQFIVLANLG-LTGGALEFLDTNDFTIMNVCDHYQMSGIE 549
P P N +F++ G +++ G + G +EF D + + + +
Sbjct: 311 PIF--DTIEGPRNDVFYNAFGNIVLICGFGNIAKGKMEFWDVETKKEIISIEVPNTTLFD 368
Query: 550 WDPTGRYVVT 579
W P G++ VT
Sbjct: 369 WAPDGQHFVT 378
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +1
Query: 253 EIKEPIQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQ-----APTLRKKFERKPFNHL 417
+I+ P++ +W+P+G A + GD + F+ ++ Q E L
Sbjct: 174 DIQLPVKGLSWDPIGKYLASLEGDK---KLRFWATDSWQCVKSVTEPFESNIEETMLTRL 230
Query: 418 FWSPSGQFIV 447
WSP G++++
Sbjct: 231 DWSPDGKYLM 240
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 421 WSPSGQFIVLANLGLTGGALEFLDTND-FTIMNVCDHYQMSGIEWDPTGRYVVT 579
WSP+G+++ ++ D T++N + G+ WDP G+Y+ +
Sbjct: 141 WSPNGKYLASGSIDYRIIIYNARKLPDRITVLNDIQ-LPVKGLSWDPIGKYLAS 193
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +1
Query: 253 EIKEPIQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQ-----APTLRKKFERKPFNHL 417
+I+ P++ +W+P+G A + GD + F+ ++ Q E L
Sbjct: 462 DIQLPVKGLSWDPIGKYLASLEGDK---KLRFWATDSWQCVKSVTEPFESNIEETMLTRL 518
Query: 418 FWSPSGQFIV 447
WSP G++++
Sbjct: 519 DWSPDGKYLM 528
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 421 WSPSGQFIVLANLGLTGGALEFLDTND-FTIMNVCDHYQMSGIEWDPTGRYVVT 579
WSP+G+++ ++ D T++N + G+ WDP G+Y+ +
Sbjct: 429 WSPNGKYLASGSIDYRIIIYNARKLPDRITVLNDIQ-LPVKGLSWDPIGKYLAS 481
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 32.3 bits (70), Expect = 0.26
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +1
Query: 139 VDRYSKVKKD-KNDIKYSGMYYN---FEIFHMREKEIPVDSVEIKEPIQAFAWEPVGSKF 306
VD K+ D K++IK S EI +R KEI +++E + F E + K
Sbjct: 347 VDNLRKIVNDLKHEIKMSESQMRRKKVEIMLIR-KEIAKAQKQLREALGKFGHEELTKKL 405
Query: 307 AIIHGDPANISISFYQVNTGQAPTLRKKFER 399
A +++I ++ Q LRKK+E+
Sbjct: 406 AEAEDKRESLNIEIEEIEHVQLKALRKKYEK 436
>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical protein
T01E8.5 protein.
Length = 1270
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 567 ASSRIPFDARHLVMVADVHNSEIVSVQKLQSST 469
AS P D+++ M+ ++H+S + V KLQ T
Sbjct: 1082 ASQAFPCDSKYAKMLGELHSSGRLQVMKLQGFT 1114
>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical protein
T01E8.5 protein.
Length = 1270
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 567 ASSRIPFDARHLVMVADVHNSEIVSVQKLQSST 469
AS P D+++ M+ ++H+S + V KLQ T
Sbjct: 1082 ASQAFPCDSKYAKMLGELHSSGRLQVMKLQGFT 1114
>AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical
protein Y71G12B.1b protein.
Length = 487
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 409 NHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVT 579
N L W PSG + + T + L + + + +G+ WDP+G+Y+ T
Sbjct: 138 NALCWDPSGTQLASVSNDHTLAVHDALTGKRLFVAS--NFRSPNGVCWDPSGKYIAT 192
>AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical
protein Y71G12B.1a protein.
Length = 489
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 409 NHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVT 579
N L W PSG + + T + L + + + +G+ WDP+G+Y+ T
Sbjct: 140 NALCWDPSGTQLASVSNDHTLAVHDALTGKRLFVAS--NFRSPNGVCWDPSGKYIAT 194
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 417 QMVERLPLELLAQSRRLPGVHLVEADRDVRRVTVDYSELRPDRFPSESLYGFL 259
Q + + L+ LAQ PG + E RV +D L PD P S +GF+
Sbjct: 420 QKINDVKLKELAQKFTSPGALITEC-----RVWMDKKRLTPDGKPKSSGFGFV 467
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 579 SHHIASSRIPFD--ARHLVMVADVHNSEIVSVQK 484
+ H AS + FD A H ++ D HN+E V+K
Sbjct: 28 NEHAASIKAKFDDYAEHYLLPEDFHNAETAPVKK 61
>M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical
protein B0303.11 protein.
Length = 903
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 79 FSVADCKIHWQKSGDYLCVKVDRYSKVKKDKNDIKYSGMYYNFEIFHMREK 231
FS CK ++ D K+D+Y KV+ + G + N +IF++REK
Sbjct: 789 FSKPPCK----QTYDEFRAKIDKY-KVETSSSGEPVDGSFDNNQIFNLREK 834
>AL132877-14|CAD92388.1| 439|Caenorhabditis elegans Hypothetical
protein Y105E8B.8b protein.
Length = 439
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -1
Query: 363 GVHLVEADRDVRRVTVDYSELRPDRFPSESLY--GFLNLDRINGYLLLSHMENFKIIIHP 190
G+H V+ ++ R T Y+ P R +S+Y D L++ NF + +
Sbjct: 137 GMHYVDLSKNPERYT-GYAGKSPQRV-WKSIYEENCFKPDPKFDKNFLTNPSNFGMCLEK 194
Query: 189 RVFYIIFVLLHFRITI 142
RVFY + LH ITI
Sbjct: 195 RVFYRLISGLHSAITI 210
>AL132877-13|CAC70110.4| 478|Caenorhabditis elegans Hypothetical
protein Y105E8B.8a protein.
Length = 478
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -1
Query: 363 GVHLVEADRDVRRVTVDYSELRPDRFPSESLY--GFLNLDRINGYLLLSHMENFKIIIHP 190
G+H V+ ++ R T Y+ P R +S+Y D L++ NF + +
Sbjct: 176 GMHYVDLSKNPERYT-GYAGKSPQRV-WKSIYEENCFKPDPKFDKNFLTNPSNFGMCLEK 233
Query: 189 RVFYIIFVLLHFRITI 142
RVFY + LH ITI
Sbjct: 234 RVFYRLISGLHSAITI 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,592,781
Number of Sequences: 27780
Number of extensions: 325244
Number of successful extensions: 1005
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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