Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_D14
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    38   0.008
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    38   0.008
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    38   0.008
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    31   1.2  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
 Frame = +2

Query: 8    VKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDK 187
            ++S+  +D+++ +        YP L  +D      K+++       ++  +K+ CD   +
Sbjct: 3089 LRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVE 3144

Query: 188  Y---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVLLTVSEPCIDXX 346
                EK ++D  ++LK I  G++     EK+    LD PFRAGA K + + V    ++  
Sbjct: 3145 QIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI-IGVRSDSLEYK 3202

Query: 347  XXXXXXXXXXXKALLENLGMSMSIVTVTPELKCGGNLAH-VVGFDESSVLMLGDKKRTKE 523
                        ++ +  G  + ++     L   G L+  ++GF+   V  +  K   K 
Sbjct: 3203 NWWKFVRAQLTGSITKFDGALIHLIAPVKGLSLEGVLSEKLIGFNSRLVATVDGKDSKK- 3261

Query: 524  SEALRATLELPSDSCIDFVQTVDGLV 601
                R  L+  +D  IDFV    G V
Sbjct: 3262 ----RTKLQFDNDMGIDFVLNNGGWV 3283


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
          Length = 1074

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
 Frame = +2

Query: 8    VKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDK 187
            ++S+  +D+++ +        YP L  +D      K+++       ++  +K+ CD   +
Sbjct: 812  LRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVE 867

Query: 188  Y---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVLLTVSEPCIDXX 346
                EK ++D  ++LK I  G++     EK+    LD PFRAGA K + + V    ++  
Sbjct: 868  QIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI-IGVRSDSLEYK 925

Query: 347  XXXXXXXXXXXKALLENLGMSMSIVTVTPELKCGGNLAH-VVGFDESSVLMLGDKKRTKE 523
                        ++ +  G  + ++     L   G L+  ++GF+   V  +  K   K 
Sbjct: 926  NWWKFVRAQLTGSITKFDGALIHLIAPVKGLSLEGVLSEKLIGFNSRLVATVDGKDSKK- 984

Query: 524  SEALRATLELPSDSCIDFVQTVDGLV 601
                R  L+  +D  IDFV    G V
Sbjct: 985  ----RTKLQFDNDMGIDFVLNNGGWV 1006


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
 Frame = +2

Query: 8    VKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDK 187
            ++S+  +D+++ +        YP L  +D      K+++       ++  +K+ CD   +
Sbjct: 3089 LRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVE 3144

Query: 188  Y---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVLLTVSEPCIDXX 346
                EK ++D  ++LK I  G++     EK+    LD PFRAGA K + + V    ++  
Sbjct: 3145 QIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI-IGVRSDSLEYK 3202

Query: 347  XXXXXXXXXXXKALLENLGMSMSIVTVTPELKCGGNLAH-VVGFDESSVLMLGDKKRTKE 523
                        ++ +  G  + ++     L   G L+  ++GF+   V  +  K   K 
Sbjct: 3203 NWWKFVRAQLTGSITKFDGALIHLIAPVKGLSLEGVLSEKLIGFNSRLVATVDGKDSKK- 3261

Query: 524  SEALRATLELPSDSCIDFVQTVDGLV 601
                R  L+  +D  IDFV    G V
Sbjct: 3262 ----RTKLQFDNDMGIDFVLNNGGWV 3283


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
            protein.
          Length = 4129

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = -2

Query: 303  LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 148
            +TA    GR+  DF+L  +++KP+FI+    +SI  +     VS  VL  G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,718,010
Number of Sequences: 53049
Number of extensions: 468007
Number of successful extensions: 1161
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)