Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D13
(383 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 46 1e-05
05_05_0309 - 23987669-23988042,23989485-23989560 46 1e-05
03_02_0817 + 11492699-11492774,11493605-11493978 46 1e-05
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 44 5e-05
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 44 5e-05
12_02_1027 + 25496311-25496811 42 2e-04
05_05_0308 - 23985165-23985556,23985624-23985699 42 2e-04
11_06_0212 - 21319441-21319498,21319737-21319867,21319944-213200... 41 3e-04
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 40 9e-04
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 38 0.002
12_01_0217 + 1647319-1648327,1648462-1648577,1648650-1648817,164... 35 0.019
11_01_0216 + 1693889-1694897,1695034-1695149,1695222-1695389,169... 35 0.019
11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348 34 0.044
01_05_0628 - 23806901-23807650 33 0.059
05_07_0229 - 28537784-28538296 33 0.10
10_07_0048 - 12354566-12354639,12355563-12355665,12355781-123559... 32 0.14
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 29 0.95
01_07_0216 - 42071041-42071496 29 1.7
02_05_1339 + 35793795-35794922,35795009-35795233,35795314-35795460 28 2.2
09_04_0397 + 17273013-17273570 26 8.9
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 26 8.9
03_05_0100 - 20779387-20779641,20779824-20780629,20780757-207810... 26 8.9
02_01_0175 - 1198657-1198737,1199080-1199190,1199488-1199540,120... 26 8.9
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 45.6 bits (103), Expect = 1e-05
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ G I +G++ TD++VDEM+REA + DG +Y EF +++
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 45.6 bits (103), Expect = 1e-05
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ G I +G++ TD++VDEM+REA + DG +Y EF +++
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 45.6 bits (103), Expect = 1e-05
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ G I +G++ TD++VDEM+REA + DG +Y EF +++
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ G I +G++ TD++V+EM+REA + DG +Y EF +++
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVM 146
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 43.6 bits (98), Expect = 5e-05
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTR 163
FD++ G I +G++ TD++VDEM+REA + DG +Y EF +
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
>12_02_1027 + 25496311-25496811
Length = 166
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ GLI +G++ TD++V++M+REA + DG ++ EF R++
Sbjct: 108 FDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIREADLDGDGQVNFDEFVRMM 161
Score = 26.2 bits (55), Expect = 8.9
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGA 181
FD++ G I +G T +++ EM+R+ + +G ++ EF ++ A
Sbjct: 23 FDKDGDGCITLEELDTVVRSLGQTPTREELAEMIRDVDVDGNGTIEFAEFLALMARKA 80
>05_05_0308 - 23985165-23985556,23985624-23985699
Length = 155
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREA-PIRDGIFDYVEFTRIL 169
FD+ +G+I GDR T+++ DEM+R+A P +G +Y EF ++L
Sbjct: 98 FDDARSGVIPAEQLRQAMVSHGDRLTEEEADEMVRKADPAGEGRVEYKEFVKVL 151
>11_06_0212 -
21319441-21319498,21319737-21319867,21319944-21320033,
21320141-21320298,21320646-21320721
Length = 170
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD+++ G I +G+ T+D++D+M++ A DG DY EF R++
Sbjct: 96 FDKDDNGFISRNELSMVMASLGEEMTEDEIDDMMKAADSNNDGQVDYEEFKRVM 149
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 39.5 bits (88), Expect = 9e-04
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ G I +G+R TD++V EM+ EA + DG +Y EF + +
Sbjct: 93 FDKDQNGFISATELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCM 146
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 5 EGFDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGA 181
E D++ G I +G++ TD++V++M+REA DG +Y EF ++K+
Sbjct: 329 EVLDKDQNGFISPTELRTVMTNLGEKMTDEEVEQMIREADTDGDGQVNYDEFVIMMKNAE 388
Query: 182 K 184
+
Sbjct: 389 R 389
Score = 33.9 bits (74), Expect = 0.044
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGAKD 187
FD+ G I +G TD ++++M+RE +GI D+ EF ++ KD
Sbjct: 258 FDKNGDGCITLEELAAVTRSLGLEPTDQELNDMMREVDTDGNGIIDFQEFLSLIARKMKD 317
Query: 188 KD 193
D
Sbjct: 318 GD 319
>12_01_0217 +
1647319-1648327,1648462-1648577,1648650-1648817,
1648911-1649038,1649121-1649220,1649329-1649433
Length = 541
Score = 35.1 bits (77), Expect = 0.019
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 5 EGFDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGA 181
+ D++N+G I G +F+D+++++++ A +GI DY EF H
Sbjct: 394 KNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQLMEAADADGNGIIDYEEFVTATVHMN 453
Query: 182 K-DKDE 196
K D++E
Sbjct: 454 KMDREE 459
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIR-DGIFDYVEFTRILKHGA 181
FD++N+G I G + +++ +++ +A DG DY EF +++ G+
Sbjct: 468 FDKDNSGYITKEELEQALKEQG-LYDANEIKDVITDADSNNDGRIDYSEFVAMMRKGS 524
>11_01_0216 +
1693889-1694897,1695034-1695149,1695222-1695389,
1695482-1695609,1695692-1695791,1696124-1696168
Length = 521
Score = 35.1 bits (77), Expect = 0.019
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 5 EGFDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGA 181
+ D++N+G I G +F+D+++++++ A +GI DY EF H
Sbjct: 394 KNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQLMEAADADGNGIIDYEEFVTATVHMN 453
Query: 182 K-DKDE 196
K D++E
Sbjct: 454 KMDREE 459
>11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348
Length = 205
Score = 33.9 bits (74), Expect = 0.044
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ G I +GD +DD++ +ML EA DG +Y EF +++
Sbjct: 98 FDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEADSDGDGQINYNEFLKVM 151
>01_05_0628 - 23806901-23807650
Length = 249
Score = 33.5 bits (73), Expect = 0.059
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGAKD 187
FD + G I MG ++ +M+REA DG+ + EFT I+ A D
Sbjct: 183 FDRDGNGFISAAELARSMARMGHPICYAELTDMMREADTDGDGLISFEEFTAIMAKSALD 242
>05_07_0229 - 28537784-28538296
Length = 170
Score = 32.7 bits (71), Expect = 0.10
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGAKD 187
FD + G I +G T +++ M+R+A DG+ + EF ++ A D
Sbjct: 106 FDRDGNGFISAAELARSMARLGQPLTFEELTRMMRDADTDGDGVISFKEFAAVMAKSALD 165
>10_07_0048 -
12354566-12354639,12355563-12355665,12355781-12355933,
12356105-12356132,12356414-12356450,12356563-12356746
Length = 192
Score = 32.3 bits (70), Expect = 0.14
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 14 DEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIR-DGIFDYVEFTRILK 172
D++N G I G+ FT D+V EM+ A DG D+ EF +++K
Sbjct: 130 DKDNNGKISDVDIQRLAIETGEPFTLDEVREMIEAADENGDGEVDHEEFLKMMK 183
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 29.5 bits (63), Expect = 0.95
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTR 163
FD++ G I + D +DD++ +ML EA DG +Y EF +
Sbjct: 541 FDKDQNGFITPDELRHVMANLSDPLSDDELADMLHEADSDGDGQINYNEFLK 592
>01_07_0216 - 42071041-42071496
Length = 151
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXX-XXXXMGDRFTDDDVDEMLREAPIR-DGIFDYVEFTRILKHGAK 184
FD++ G I +G+ D++V ++ A DG+ D EF R++
Sbjct: 14 FDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLDEEEFVRLVTEMEA 73
Query: 185 DKDEQ 199
D DE+
Sbjct: 74 DGDEE 78
>02_05_1339 + 35793795-35794922,35795009-35795233,35795314-35795460
Length = 499
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 89 DDDVDEMLREAPI-RDGIFDYVEFTRILKHGAKD 187
D +D+++RE DG DY EF ++K GA D
Sbjct: 437 DVGIDDIIREVDQDNDGRIDYGEFVAMMKKGAID 470
>09_04_0397 + 17273013-17273570
Length = 185
Score = 26.2 bits (55), Expect = 8.9
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAP-IRDGIFDYVEFTRILKHGAK 184
FD++ G I +GD + +D EM+++ RDG D +F ++ K
Sbjct: 125 FDQDGDGRISAEEVMQVLHKLGDSCSLEDCREMVKKIDRNRDGFVDMDDFMAMMTRSRK 183
>04_01_0399 -
5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 26.2 bits (55), Expect = 8.9
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 78 IASLMTMWTKCFVKLPYVMESSITLSSR-VF*NMVLRI 188
I L T WTKC V P V S + + + VF + LR+
Sbjct: 307 IGKLSTEWTKCLV--PLVSSSKVKIQGKIVFPTVELRL 342
>03_05_0100 -
20779387-20779641,20779824-20780629,20780757-20781011,
20781107-20781221,20781301-20781353,20781517-20781777,
20782804-20782854,20783081-20783329,20784765-20784990,
20785968-20786132
Length = 811
Score = 26.2 bits (55), Expect = 8.9
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = -2
Query: 217 ANGICLLFVLILSTMFQNTRELNVIEDSITYGSFTKHFVHIVISEAITHSG--QQFTK-S 47
A+ IC++FV+I++T+ L V + SI Y + F+ + SE+I S QF
Sbjct: 457 AHAICVVFVMIITTLLLTIVMLLVWKVSIWYVAL--FFIVFMSSESIYLSAVLYQFVHGE 514
Query: 46 FLTDQTSVFLI 14
++ SVFL+
Sbjct: 515 YVPVAMSVFLM 525
>02_01_0175 -
1198657-1198737,1199080-1199190,1199488-1199540,
1200131-1200215,1200519-1200614,1200729-1200821,
1201640-1201696,1201826-1201975,1202819-1202893
Length = 266
Score = 26.2 bits (55), Expect = 8.9
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 187 ILSTMFQNTRELNVIEDSITYGSFTKHFVHIVISEAITHSGQQFTK--SFLTDQTSVFLI 14
+++ F +T +L +IE+ IT + HF+ + E +H +++ K S L S ++
Sbjct: 82 LVNDRFGSTEQLKIIEEDITKFNVRSHFLPFL--EEKSHHTRKYAKVVSNLPFNVSTEVV 139
Query: 13 KTLV 2
K L+
Sbjct: 140 KLLL 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,657,523
Number of Sequences: 37544
Number of extensions: 132384
Number of successful extensions: 269
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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