Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D13
(383 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 80 6e-16
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 80 6e-16
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 44 5e-05
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 44 5e-05
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 41 3e-04
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 41 3e-04
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 40 6e-04
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 40 6e-04
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 39 0.001
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.010
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 35 0.023
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 34 0.030
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 34 0.030
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 34 0.030
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 33 0.069
Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical pr... 30 0.49
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 30 0.49
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 28 2.6
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 28 2.6
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 26 7.9
U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical pr... 26 7.9
AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three par... 26 7.9
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 79.8 bits (188), Expect = 6e-16
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIRDGIFDYVEFTRILKHGAKDK 190
FDE+N+G + MG+R++++ VDE+ R+API+ G FDYVEFTR+LKHG KDK
Sbjct: 110 FDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAPIKGGQFDYVEFTRMLKHGTKDK 169
Query: 191 DE 196
DE
Sbjct: 170 DE 171
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 79.8 bits (188), Expect = 6e-16
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIRDGIFDYVEFTRILKHGAKDK 190
FDE+N+G + MG+R++++ VDE+ R+API+ G FDYVEFTR+LKHG KDK
Sbjct: 110 FDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAPIKGGQFDYVEFTRMLKHGTKDK 169
Query: 191 DE 196
DE
Sbjct: 170 DE 171
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 43.6 bits (98), Expect = 5e-05
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ G I +G++ TD++VDEM+REA I DG +Y EF ++
Sbjct: 93 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 43.6 bits (98), Expect = 5e-05
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
FD++ G I +G++ TD++VDEM+REA I DG +Y EF ++
Sbjct: 93 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKH 175
FD++ G+I MG +F++++VDEM++E + DG DY EF +++ +
Sbjct: 162 FDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMMSN 217
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGAKD 187
FD++ G I +G T+ ++ EM+ E I +G ++ EF ++K K+
Sbjct: 90 FDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMKE 149
Query: 188 KDEQ 199
D +
Sbjct: 150 TDSE 153
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKH 175
FD++ G+I MG +F++++VDEM++E + DG DY EF +++ +
Sbjct: 105 FDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMMSN 160
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILKHGAKD 187
FD++ G I +G T+ ++ EM+ E I +G ++ EF ++K K+
Sbjct: 33 FDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMKE 92
Query: 188 KDEQ 199
D +
Sbjct: 93 TDSE 96
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEF 157
FD + G I MGD+F+D +VDE++ E I DG DY EF
Sbjct: 116 FDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEF 165
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEF 157
FD + G I MGD+F+D +VDE++ E I DG DY EF
Sbjct: 116 FDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEF 165
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFT 160
FD++ G I +G++ TD++VDEM+REA I DG V F+
Sbjct: 42 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQIMRVSFS 92
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.010
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRILK 172
FD+ G+I +G++ T+ + EM+++ + DG+ D+ EF I+K
Sbjct: 89 FDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQEFVNIIK 143
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 34.7 bits (76), Expect = 0.023
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIRDG 136
FD++ G I MG+RF++++VDE++RE +DG
Sbjct: 104 FDKDGNGYITAQEFKHFMTTMGERFSEEEVDEIIREVD-KDG 144
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 34.3 bits (75), Expect = 0.030
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIR-DGIFDYVEFTRILKHGAKD 187
FD G I +GD + +DE+ EA + +G+ DY EFT ++K+ D
Sbjct: 139 FDRSENGGISKKDFRFILRELGDITDNQIIDEIFNEADVDGNGVIDYDEFTYMVKNYMTD 198
Query: 188 KD 193
D
Sbjct: 199 DD 200
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 34.3 bits (75), Expect = 0.030
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIRDGIFDYVEF-TRILKHGAKD 187
FD+E TG I +G+R + D+ DE+L+ +G+ Y +F ++L D
Sbjct: 92 FDKEETGKILAAELRHILLALGERLSADEADELLKGVEDGEGMVKYEDFIKKVLAGPFPD 151
Query: 188 KD 193
+D
Sbjct: 152 QD 153
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 34.3 bits (75), Expect = 0.030
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIRDGIFDYVEF-TRILKHGAKD 187
FD+E TG I +G+R + D+ DE+L+ +G+ Y +F ++L D
Sbjct: 92 FDKEETGKILAAELRHILLALGERLSADEADELLKGVEDGEGMVKYEDFIKKVLAGPFPD 151
Query: 188 KD 193
+D
Sbjct: 152 QD 153
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 33.1 bits (72), Expect = 0.069
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIRDGIFDYVEFTR 163
FD+E G+I +G+R +D+DVD++L G + +F R
Sbjct: 87 FDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLSGHNDSHGNVNISDFVR 137
>Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical
protein R08D7.5 protein.
Length = 148
Score = 30.3 bits (65), Expect = 0.49
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREA 121
FD E+ G I +G+ D D DEM+REA
Sbjct: 89 FDPESKGTITVANLKMVAKELGETLADADFDEMIREA 125
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 30.3 bits (65), Expect = 0.49
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRI 166
FD + G+I MG F + +V+EM+ E +G DY EF +I
Sbjct: 110 FDRDGNGVITANEFKLFMINMGMCFDEVEVEEMMNEVDCDGNGEIDYEEFVKI 162
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
+D+E G I + D +++++DEM+ E G D+ EF ++
Sbjct: 104 YDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPI-RDGIFDYVEFTRIL 169
+D+E G I + D +++++DEM+ E G D+ EF ++
Sbjct: 104 YDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEML 112
FD+E G I MGD+ +D++ D+++
Sbjct: 90 FDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLV 123
>Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical
protein ZK1067.5 protein.
Length = 427
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -2
Query: 298 IAHIFHFFLRKSMFFNSNLCIFY-*MEFANGICLLFVLILSTMFQNTRELNVIEDSITYG 122
++H FHFFL N L +F+ + FA ++ L T ++ EL+ + +Y
Sbjct: 112 VSHYFHFFLISCFLANLRLALFHLVLIFATVAYIIAGAYLFTKIEHQAELDRYQ---SYH 168
Query: 121 SFTKHFVH 98
+ ++F++
Sbjct: 169 TIYRNFIN 176
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 26.2 bits (55), Expect = 7.9
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 11 FDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEMLREAPIRDGIFDYVEF-TRILKHGAKD 187
FD E G I G++ T+ +VD +L + DG + F R L+ G ++
Sbjct: 91 FDREGNGQIMLMELKSMLQNGGEKMTNQEVDNLLFGVEVVDGRININNFLNRHLQMGLEE 150
Query: 188 KDE 196
++
Sbjct: 151 SEK 153
>U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical
protein C49C8.1 protein.
Length = 517
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 78 IASLMTMWTKCFVKLPYVMESSITLSSRVF*NMVLRIRTNSKQI 209
I SLM M + FV+LP+ I L + +LR+ ++ K I
Sbjct: 297 IWSLMYMVAEFFVELPWTSNEEIALEELKNQSSILRLFSDGKNI 340
>AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three
paralog protein 3 protein.
Length = 739
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 71 MGDRFTDDDVDEMLREAPIRDGIFDYVEFTRILKHGAKDKDEQ*TNSI 214
+ D TDD V+E +RE+PI + ++ R ++ A++ + N I
Sbjct: 540 VADLPTDDTVEEDVRESPIYGRVPSILDVARAEENDAQNDAQDAQNEI 587
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,276,825
Number of Sequences: 27780
Number of extensions: 137008
Number of successful extensions: 355
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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