Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_D13
         (383 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.2  
X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           21   3.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   4.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.5  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              20   8.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   8.6  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    20   8.6  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +1

Query: 229 NKKYRDLN*--KTYFFLKKNEKYEQ 297
           N   RD+N      +F+ KN+KYE+
Sbjct: 69  NSAKRDINDVLNVLYFINKNDKYEE 93


>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 151 NVIEDSITYGSFTK 110
           NVI D++TY   TK
Sbjct: 65  NVIRDAVTYTEHTK 78


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 157 HAYFETWC*G*GRTVNKFHWQTP 225
           +AY + +C    RT++K  W+ P
Sbjct: 18  NAYKQGFCQPTQRTMSKIQWRKP 40


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 100 HIVISEAITHSGQQFTKSFL 41
           H  +  A  HSG   TKS L
Sbjct: 128 HCELHRAACHSGSSLTKSRL 147


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 226 FNKKYRDLN*KTYF 267
           FNK Y +L+ +TY+
Sbjct: 130 FNKCYAELSPRTYY 143


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 152 QRNRRFHHVWELHEAFRPH 96
           Q NR  +  WEL+    PH
Sbjct: 5   QPNRPSYCTWELNATNSPH 23


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 35  SNQCFPHQN 9
           SN C PH+N
Sbjct: 104 SNPCLPHRN 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,785
Number of Sequences: 438
Number of extensions: 1663
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)