Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_D02
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   2.4  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   4.2  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   4.2  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   4.2  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   4.2  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   4.2  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    23   5.6  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 359 ILKKNPHKYTIKTHPYTHRETYTR 430
           IL   PH+Y ++ +  +  E Y R
Sbjct: 173 ILASEPHRYVVQRYESSEEELYAR 196


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 8   GQSWLYCPRCKMMFLDQMKKFVEW 79
           G   L+C RCK+M+ D  K F ++
Sbjct: 170 GLLMLFCYRCKIMY-DDRKMFAKF 192


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 8   GQSWLYCPRCKMMFLDQMKKFVEW 79
           G   L+C RCK+M+ D  K F ++
Sbjct: 170 GLLMLFCYRCKIMY-DDRKMFAKF 192


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 8   GQSWLYCPRCKMMFLDQMKKFVEW 79
           G   L+C RCK+M+ D  K F ++
Sbjct: 170 GLLMLFCYRCKIMY-DDRKMFAKF 192


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 8   GQSWLYCPRCKMMFLDQMKKFVEW 79
           G   L+C RCK+M+ D  K F ++
Sbjct: 170 GLLMLFCYRCKIMY-DDRKMFAKF 192


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 8   GQSWLYCPRCKMMFLDQMKKFVEW 79
           G   L+C RCK+M+ D  K F ++
Sbjct: 746 GLLMLFCYRCKIMY-DDRKMFAKF 768


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 195 DTYKHTDRQTDRNSNRRTALLIYP 266
           +T   T + +  N+NR T L  YP
Sbjct: 23  NTNAQTKQDSSNNNNRTTELFAYP 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,591
Number of Sequences: 2352
Number of extensions: 9433
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)