Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D01
(398 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0433 + 3353255-3353374,3353532-3353828 180 5e-46
10_08_0018 + 14164103-14164225,14164596-14164892 174 2e-44
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 151 2e-37
12_02_0605 - 20924385-20924606,20924705-20924899 115 1e-26
12_02_0151 - 14468480-14468698,14468902-14469090 113 4e-26
07_03_0790 + 21536389-21536577,21536854-21537072 113 4e-26
07_03_0791 + 21539069-21539257,21539493-21539711 111 1e-25
03_05_0949 + 29089293-29089487,29089592-29089810 109 6e-25
05_05_0119 - 22512228-22512500,22512577-22512795 106 6e-24
03_02_0562 - 9469263-9469517,9469619-9469843 105 1e-23
05_01_0107 + 706936-707202,707231-707485 89 2e-18
08_02_0735 + 20564451-20564525,20566346-20566561 73 6e-14
02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098 31 0.44
12_02_0680 + 21903520-21904093,21904474-21905162 30 0.59
06_03_0197 + 17794418-17794771,17795040-17795549 30 0.59
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 28 2.4
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703... 28 3.1
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 3.1
02_02_0707 + 13144147-13144788,13145115-13148663 28 3.1
07_03_0898 - 22403337-22404950 27 7.2
04_01_0213 - 2692253-2694562 27 7.2
07_03_0899 + 22421038-22422642 26 9.5
07_01_0068 - 495582-497981 26 9.5
>03_01_0433 + 3353255-3353374,3353532-3353828
Length = 138
Score = 180 bits (437), Expect = 5e-46
Identities = 87/94 (92%), Positives = 91/94 (96%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRIHR LK+R ++HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR
Sbjct: 39 LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 98
Query: 297 HLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLI 398
HLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI
Sbjct: 99 HLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLI 132
>10_08_0018 + 14164103-14164225,14164596-14164892
Length = 139
Score = 174 bits (424), Expect = 2e-44
Identities = 84/94 (89%), Positives = 90/94 (95%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
+QFPVGRIHR LK R +++GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVKRITPR
Sbjct: 40 IQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPR 99
Query: 297 HLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLI 398
HLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI
Sbjct: 100 HLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLI 133
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 151 bits (366), Expect = 2e-37
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +3
Query: 123 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 302
FPVGRIHR LK RT ++GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL
Sbjct: 65 FPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 124
Query: 303 QLAIRGDEELDSLIKATIAGGGV 371
QLAIRGDEELD+LIK TIAGG V
Sbjct: 125 QLAIRGDEELDTLIKGTIAGGVV 147
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 115 bits (277), Expect = 1e-26
Identities = 60/95 (63%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K RI PR
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPR 85
Query: 297 HLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLI 398
H+QLA+R DEEL L+ A TIA GGV+P+IH++L+
Sbjct: 86 HIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLL 120
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 113 bits (273), Expect = 4e-26
Identities = 61/95 (64%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 297 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLI 398
H+QLA+R DEEL L+ ATIA GGV+P+IH+ L+
Sbjct: 84 HIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLL 118
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 113 bits (273), Expect = 4e-26
Identities = 61/95 (64%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 297 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLI 398
H+QLA+R DEEL L+ ATIA GGV+P+IH+ L+
Sbjct: 84 HIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLL 118
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 111 bits (268), Expect = 1e-25
Identities = 60/95 (63%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 297 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLI 398
H+QLA+R DEEL L+ TIA GGV+P+IH L+
Sbjct: 84 HIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLL 118
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 109 bits (263), Expect = 6e-25
Identities = 58/95 (61%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K RI PR
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPR 85
Query: 297 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLI 398
H+QLA+R DEEL L+ TIA GGV+P+I + L+
Sbjct: 86 HIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLL 120
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 106 bits (255), Expect = 6e-24
Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRI R+LK S R+G A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 35 LQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPR 93
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
H+ LAIR DEEL L+ TIA GGV+P+I+ L+
Sbjct: 94 HVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 128
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 105 bits (252), Expect = 1e-23
Identities = 57/95 (60%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRI R+LK + R+G A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 37 LQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPR 95
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
H+ LAIR DEEL L+ TIA GGV+P+I+ L+
Sbjct: 96 HVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 130
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 88.6 bits (210), Expect = 2e-18
Identities = 58/112 (51%), Positives = 69/112 (61%), Gaps = 18/112 (16%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE-----------------VLE 245
LQFPVGRI R+LK + RVG A VY AA+LEYL AE VLE
Sbjct: 34 LQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEASHCLSLPLPNPSKPSMVLE 92
Query: 246 LAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
LAGNA++D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+
Sbjct: 93 LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 144
>08_02_0735 + 20564451-20564525,20566346-20566561
Length = 96
Score = 73.3 bits (172), Expect = 6e-14
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +3
Query: 225 LTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLI 398
L+ +VLELAGNA++D K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH L+
Sbjct: 22 LSIKVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLL 80
>02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098
Length = 142
Score = 30.7 bits (66), Expect = 0.44
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 297 HLQLAIRGDEELDSLIKATIAGGG 368
HL L + G EELD L++ I GGG
Sbjct: 37 HLSLGVGGAEELDLLLQVGIGGGG 60
>12_02_0680 + 21903520-21904093,21904474-21905162
Length = 420
Score = 30.3 bits (65), Expect = 0.59
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 150 LKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR-HLQLAIRGDE 326
L +R +SHG A Y A + L GNA + + +TP HL + R D
Sbjct: 52 LHHRGSSHGESRGIRATYPQARYPPMVRLAARLWGNAEAEAGYRVLTPTPHLDMGPRADP 111
Query: 327 ELDSLIKATIAGGG 368
L +A I GG
Sbjct: 112 AL----RAAIQNGG 121
>06_03_0197 + 17794418-17794771,17795040-17795549
Length = 287
Score = 30.3 bits (65), Expect = 0.59
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 373 ITPPPAMVALIRLXXXXSPLMASCKCLGVIRLTFKS 266
ITPP A +A I+ PLM + +GV+ L F+S
Sbjct: 143 ITPPSAFMASIKFRNDKCPLMPAKMPIGVLSLLFQS 178
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 291 PRHLQLAIRGDEELDSLIKATIAGGGVIP 377
PRH+ + G E D L A+ AGG P
Sbjct: 174 PRHVSRVVIGSEVFDRLASASAAGGWAAP 202
>07_03_1555 -
27669981-27670148,27670232-27670315,27670349-27670360,
27670683-27670761,27670840-27671078,27671167-27671260,
27671342-27671484,27671688-27671786,27671870-27671998,
27672123-27672197,27672308-27672520,27672581-27672676,
27673282-27673380,27673600-27673839,27674212-27674322,
27674429-27674626,27674720-27674835,27675076-27675193,
27675761-27675866,27675972-27676030,27676259-27676388,
27676730-27676887,27677672-27677887,27677972-27678082,
27678313-27678472,27679364-27679509,27679603-27679695,
27680610-27680706,27681224-27681294,27681407-27681505,
27682037-27682168,27682287-27682729,27683252-27683564,
27684301-27684549
Length = 1631
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 107 QSGLTVSSRKNPQTSQK*NYKSRSCR-SYGSSLFCCYSGISNSRGFRVSGKCI 262
Q+GL +S+ T+Q + +C YG+S C Y + R +R+S K +
Sbjct: 732 QNGLRMSASIVADTAQCFSTHQFACLIGYGASAICPYLALETCRQWRLSNKTV 784
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 252 GNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGG 365
G+ ++ + +T R I+ D E+D+L+KAT+ G
Sbjct: 274 GSGARYDMLSELTRRERNAGIKPDPEIDALMKATVVEG 311
>02_02_0707 + 13144147-13144788,13145115-13148663
Length = 1396
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 103 RPERAYSFQ*EESTDISKIELQVTVVSELRQQFILL 210
RP+R S +EST + +EL +TV R + +LL
Sbjct: 967 RPQRITSSLDDESTSVFCLELLITVTLNNRDRIVLL 1002
>07_03_0898 - 22403337-22404950
Length = 537
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 343 IRLXXXXSPLMASCKCLGVIRLTFKSFDAFPANSKTSAVRYSRIAAE*TAAVAP 182
+RL + ASC V+ + S + FP + + SAV R AA VAP
Sbjct: 417 LRLAAELASFFASCAAFDVMLMY--SIELFPTSVRNSAVGLVRKAAVLGGVVAP 468
>04_01_0213 - 2692253-2694562
Length = 769
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 19 NSVLHVSKWLVVKRARILVKPRRKLYRDRPERAY 120
+S+L KW +++R+ + + P R +D P +Y
Sbjct: 351 HSLLCSGKWRMIRRSIVSLDPSRFFSKDHPTTSY 384
>07_03_0899 + 22421038-22422642
Length = 534
Score = 26.2 bits (55), Expect = 9.5
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = -2
Query: 379 CGITPPPAMVA---LIRLXXXXSPLMASCKCLGVIRLTFKSFDAFPANSKTSAVRYSRIA 209
C + P P A +RL + ASC V L S + FP + + SAV R A
Sbjct: 412 CVVIPDPEAGAGGSHLRLAAELASFFASCAAYDV--LLMYSIELFPTSVRNSAVGLVRQA 469
Query: 208 AE*TAAVAP 182
VAP
Sbjct: 470 GVLGGVVAP 478
>07_01_0068 - 495582-497981
Length = 799
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 243 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAG 362
E + + +K + + IT LQLA + +E+D L+K + G
Sbjct: 551 ESSSSTTKKKEAEEITHDVLQLADKKKKEIDDLVKEKLDG 590
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,056,954
Number of Sequences: 37544
Number of extensions: 172214
Number of successful extensions: 528
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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