Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_D01
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical p... 175 1e-44
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 111 1e-25
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 111 1e-25
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 111 1e-25
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 111 1e-25
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 111 1e-25
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 111 1e-25
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 111 1e-25
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 111 1e-25
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 111 1e-25
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 111 1e-25
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 111 1e-25
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 111 1e-25
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 111 1e-25
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 111 1e-25
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 111 1e-25
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 111 1e-25
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 111 1e-25
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 111 1e-25
Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical pr... 94 3e-20
AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin... 27 3.7
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 5.0
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 27 5.0
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 27 5.0
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 27 6.5
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 27 6.5
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z48045-3|CAA88104.1| 342|Caenorhabditis elegans Hypothetical pr... 26 8.7
U42844-7|AAB53819.1| 331|Caenorhabditis elegans Skn-1 dependent... 26 8.7
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 26 8.7
>U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical
protein R08C7.3 protein.
Length = 140
Score = 175 bits (425), Expect = 1e-44
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGRIHR LK RTTS GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR
Sbjct: 28 LQFPVGRIHRFLKQRTTSSGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 87
Query: 297 HLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLI 398
HL LAIRGDEELD+LIKATIAGGGVIPHIH+ L+
Sbjct: 88 HLHLAIRGDEELDTLIKATIAGGGVIPHIHRYLM 121
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 111 bits (268), Expect = 1e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPR 83
Query: 297 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 398
HLQLA+R DEEL+ L+ TIA GGV+P+I L+
Sbjct: 84 HLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLL 118
>Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical
protein ZK1251.1 protein.
Length = 145
Score = 94.3 bits (224), Expect = 3e-20
Identities = 49/96 (51%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 117 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 296
L FPVGRIHR L+ T R+ A A+V+ AA LEYLT E++E++ A+ + K R+TPR
Sbjct: 36 LTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESKKSRVTPR 95
Query: 297 HLQLAIRGDEELDSLI-KATIAGGGVIP-HIHKSLI 398
HL LAI GD+E L+ K T+ GGV P IH SL+
Sbjct: 96 HLHLAIYGDQETAQLLDKVTLPQGGVTPMPIHPSLL 131
>AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin
protein 3 protein.
Length = 409
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 245 VSGKCIKGLESQTYHPKTFATC 310
V+GKC++ +TYH + TC
Sbjct: 29 VNGKCLRLFHEETYHTRAEQTC 50
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 107 QSGLTVSSRKNPQTSQK*NYKSRSCRSYGSSLFCCYSGISNSRGFRVSGKCIKGLESQTY 286
+SG T SS ++ + ++ +SRS + + S + F G CI+G + Y
Sbjct: 171 RSGRTSSSDRDRHSKRRSRSRSRSSSGSRTPPYKSRSSRRRCKDFEERGYCIRGDQCPYY 230
Query: 287 H 289
H
Sbjct: 231 H 231
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 155 FEMSVDSSYWKL*ARSGRSRYSFRLGFTRILARFTTSHFETCNTLLS 15
F MS + W+L RSG+ Y+ G L F T+ +C+ S
Sbjct: 322 FTMSFQRATWRLNGRSGKVIYTSATGPLVWLTTFDTTFAASCDNSTS 368
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 110 SGRSRYS-FRLGFTRILARFTTSHFETCNTLLSLQPR 3
S R+ Y +L F RIL+R SHFE + L + +
Sbjct: 515 SDRNIYDELKLSFERILSRIKVSHFENSSEHLQFEEK 551
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 25 VLHVSKWLVVKRARILVKPRRKLYRDRPERAYSFQ*EESTDISKIELQVTVVSEL 189
V +W+V + RI R+ RPER S E+ + IS + + V+S +
Sbjct: 466 VKRTDRWVVSMKKRIARALIRRRSTTRPERGSSSNSEKISTISTVITREKVISSI 520
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 25 VLHVSKWLVVKRARILVKPRRKLYRDRPERAYSFQ*EESTDISKIELQVTVVSEL 189
V +W+V + RI R+ RPER S E+ + IS + + V+S +
Sbjct: 466 VKRTDRWVVSMKKRIARALIRRRSTTRPERGSSSNSEKISTISTVITREKVISSI 520
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 260 CISR*L*NLGC*IFQNSSRINCCRSSDTTVTCSSIFEMS 144
C+S + + G F SS I CR S +T CSS S
Sbjct: 1409 CVSPPVSDGGQPCFGRSSEITECRQSPSTALCSSFITSS 1447
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 260 CISR*L*NLGC*IFQNSSRINCCRSSDTTVTCSSIFEMS 144
C+S + + G F SS I CR S +T CSS S
Sbjct: 1409 CVSPPVSDGGQPCFGRSSEITECRQSPSTALCSSFITSS 1447
>Z48045-3|CAA88104.1| 342|Caenorhabditis elegans Hypothetical
protein C41C4.6 protein.
Length = 342
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -1
Query: 377 WNNTSTSNGGFNQTVKFFVSSDGKLQMSWGDTFDF 273
W+N S F+ + +S + K+ + +GD DF
Sbjct: 180 WHNLSLRQHAFDSEDEKMMSDEQKMDLKFGDLHDF 214
>U42844-7|AAB53819.1| 331|Caenorhabditis elegans Skn-1 dependent
zygotic transcriptprotein 2 protein.
Length = 331
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 219 EYLTAEVLELAGNASKDLKVKRITPRHLQL 308
EYL E E NASKD+ +K++ L+L
Sbjct: 38 EYLEKENREFVVNASKDIAMKKLALTLLEL 67
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 260 CISR*L*NLGC*IFQNSSRINCCRSSDTTVTCSSIFEMS 144
C+S + + G F SS I CR S +T CSS S
Sbjct: 1409 CVSPPVSDGGQPCFGRSSEITECRQSPSTALCSSFITSS 1447
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,462,560
Number of Sequences: 27780
Number of extensions: 147576
Number of successful extensions: 502
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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