Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_C23
         (347 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09788-1|CAA70926.1|  845|Homo sapiens mucin protein.                  32   0.43 
U78554-1|AAC51344.1|  644|Homo sapiens mucin protein.                  32   0.43 
U95031-1|AAB65151.1|  879|Homo sapiens sublingual gland mucin pr...    31   0.75 
BC064841-1|AAH64841.1|  430|Homo sapiens MYO5C protein protein.        30   1.7  
AF272390-1|AAF78783.1| 1742|Homo sapiens myosin 5c protein.            30   1.7  

>Y09788-1|CAA70926.1|  845|Homo sapiens mucin protein.
          Length = 845

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 149 TYVLNRQRHASLTNIRWCLSGCFCVATSKILSLKCPNKMLLLH 277
           TYVL R+ HA   N+   L   +C A++   + +CP + L +H
Sbjct: 181 TYVLMREIHARFGNLSLYLDNHYCTASATAAAARCP-RALSIH 222


>U78554-1|AAC51344.1|  644|Homo sapiens mucin protein.
          Length = 644

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 149 TYVLNRQRHASLTNIRWCLSGCFCVATSKILSLKCPNKMLLLH 277
           TYVL R+ HA   N+   L   +C A++   + +CP + L +H
Sbjct: 319 TYVLMREIHARFGNLSLYLDNHYCTASATAAAARCP-RALSIH 360


>U95031-1|AAB65151.1|  879|Homo sapiens sublingual gland mucin
           protein.
          Length = 879

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 149 TYVLNRQRHASLTNIRWCLSGCFCVATSKILSLKCP 256
           TYVL R+ HA   N+   L   +C A++   + +CP
Sbjct: 231 TYVLMREIHARFGNLSLYLDNHYCTASATAAAARCP 266


>BC064841-1|AAH64841.1|  430|Homo sapiens MYO5C protein protein.
          Length = 430

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 89  HLKKGNFQKFNY*NMGGNYLAILAAINPR 3
           HLK G+ ++FNY  MGGN   ++  +N R
Sbjct: 274 HLKLGSAEEFNYTRMGGN--TVIEGVNDR 300


>AF272390-1|AAF78783.1| 1742|Homo sapiens myosin 5c protein.
          Length = 1742

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 89  HLKKGNFQKFNY*NMGGNYLAILAAINPR 3
           HLK G+ ++FNY  MGGN   ++  +N R
Sbjct: 274 HLKLGSAEEFNYTRMGGN--TVIEGVNDR 300


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,833,595
Number of Sequences: 237096
Number of extensions: 711949
Number of successful extensions: 892
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)