Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_C20
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.1  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   7.1  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   7.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   7.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   7.1  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -2

Query: 321 YCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPP 214
           YC A++  + ++AV    D++    F     ++ PP
Sbjct: 216 YCYAQKHVKSIRAVTKLPDTSMAKSFVRKVHATKPP 251


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 272 QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKI 379
           ++ T   N AL LAE Y   G  +S    KR+  K+
Sbjct: 879 ESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKV 914


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 272  QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKI 379
            ++ T   N AL LAE Y   G  +S    KR+  K+
Sbjct: 917  ESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKV 952


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 122 ENLDIDRAHANYRAITN 172
           +++DIDR   N R +TN
Sbjct: 26  DDMDIDRILQNGRILTN 42


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 122 ENLDIDRAHANYRAITN 172
           +++DIDR   N R +TN
Sbjct: 26  DDMDIDRILQNGRILTN 42


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 123 SLSETILYVSAWMP 82
           ++SE  LY++ W+P
Sbjct: 121 NISEDCLYLNIWVP 134


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 123 SLSETILYVSAWMP 82
           ++SE  LY++ W+P
Sbjct: 121 NISEDCLYLNIWVP 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,625
Number of Sequences: 438
Number of extensions: 2111
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)