Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_C18
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z70038-2|CAA93885.2|  399|Caenorhabditis elegans Hypothetical pr...    28   3.2  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    28   3.2  
AF016672-4|AAD47126.1|  968|Caenorhabditis elegans Hypothetical ...    28   3.2  
Z99771-1|CAB16919.2|  910|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z66511-8|CAA91319.2|  910|Caenorhabditis elegans Hypothetical pr...    28   4.3  
L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AL117193-10|CAB60304.1|  337|Caenorhabditis elegans Hypothetical...    28   4.3  
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U41013-3|AAA82302.1|  433|Caenorhabditis elegans Protein kinase ...    27   5.7  
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n...    27   5.7  
Z82055-5|CAB04847.1|  229|Caenorhabditis elegans Hypothetical pr...    27   7.5  
L07143-2|AAB37087.3|  437|Caenorhabditis elegans Protein kinase ...    27   7.5  
AF101319-3|AAC69355.1|  331|Caenorhabditis elegans Hypothetical ...    27   7.5  
AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical ...    27   7.5  
AF125960-3|AAD14737.1|  446|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical
           protein T06D8.5 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 67  LAYKHWQGVVNFGLYNNLIEAE--MEIYFEKEVRIIDVSQNTSFLEISNNRRDFVIKPNG 240
           L Y  W       +  N++      + +FE +V +  V +N ++L + +    F+I    
Sbjct: 273 LVYNSWPKFAENWIPENMLSRSPTWKNFFENDVTVQFVHRNLAYLTVISVLSTFLIGRRA 332

Query: 241 PIPK 252
           PIPK
Sbjct: 333 PIPK 336


>Z70038-2|CAA93885.2|  399|Caenorhabditis elegans Hypothetical
           protein ZK1067.3 protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = +1

Query: 247 PKNYFFHLSVENLNGNENDVPVVSRFVLNNVTLCNDVIKASQTINSLNVTSN 402
           P+     L +     N +    VS F LNN+T      K S T NSLN T N
Sbjct: 140 PRVSLMPLGINVFEANSSQRNEVSEF-LNNITSGATPGKPSSTNNSLNTTGN 190


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 26/86 (30%), Positives = 39/86 (45%)
 Frame = +1

Query: 166 IDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSVENLNGNENDVPVVSRFVLNNVTL 345
           +DVS     LE S + + F +  NGP  KN  F  +V   + ++  +    RF  N  TL
Sbjct: 151 VDVSWQIPQLEASTHLKAFKLIVNGPDGKNTCFVFNVTQTHVDDEGISPRYRFSSN--TL 208

Query: 346 CNDVIKASQTINSLNVTSNYADKYYA 423
            +     + TI SL ++   A K  A
Sbjct: 209 FDFGHNYTVTIVSLPMSRKRAPKVSA 234


>AF016672-4|AAD47126.1|  968|Caenorhabditis elegans Hypothetical
           protein F56D12.6a protein.
          Length = 968

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +1

Query: 250 KNYFFHLSVENLNGNENDVPVVSRFVLNNVTLCNDVIKASQTINSLNVTSNY 405
           K++ F +  ENL  +E  V  V++FV   +++ ++ +KA     S+N  S+Y
Sbjct: 16  KHHGFQVLQENLKKSEETVAEVAQFVKERLSVEDEYVKAIN--RSVNKVSHY 65


>Z99771-1|CAB16919.2|  910|Caenorhabditis elegans Hypothetical
           protein D1043.1 protein.
          Length = 910

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 267 MEKV-ILRYRTVRFYNKVASVVTYFEEAGILRYVNYPNFFFEIYFHFSF 124
           +EK+ +L+Y      + + ++++   +  IL Y+  P FFF+ ++H  F
Sbjct: 715 IEKIRLLKYENSPNIHTIKTLLSILNQLTILPYM-LPRFFFQQFYHVDF 762


>Z66511-8|CAA91319.2|  910|Caenorhabditis elegans Hypothetical
           protein D1043.1 protein.
          Length = 910

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 267 MEKV-ILRYRTVRFYNKVASVVTYFEEAGILRYVNYPNFFFEIYFHFSF 124
           +EK+ +L+Y      + + ++++   +  IL Y+  P FFF+ ++H  F
Sbjct: 715 IEKIRLLKYENSPNIHTIKTLLSILNQLTILPYM-LPRFFFQQFYHVDF 762


>L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical
           protein ZK686.2 protein.
          Length = 593

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = +1

Query: 331 NNVTLCNDVIKASQTINSLNVTSNY----ADKYYAHVCGR 438
           N V +C+DV+     +N ++   NY     DK + H  GR
Sbjct: 450 NRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGR 489


>AL117193-10|CAB60304.1|  337|Caenorhabditis elegans Hypothetical
           protein Y105C5A.17 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
 Frame = -2

Query: 309 GYVIFITIQIFNAQMEKVILRYRTVRFYNKVASVVTYFEEAGILRYVNYPNFF---FEIY 139
           GY+    +     +   ++L   +V + N    +  YF    IL+ +   N F     I 
Sbjct: 224 GYLCNSGMSFSKTEFSSLLLTVLSVIYINVFRKLFQYFLHISILKQIANENMFRPIIAIS 283

Query: 138 FHFSFNQVVIQTEVNNTL 85
             +S   +++Q  VN+T+
Sbjct: 284 HAYSVQNMILQNTVNSTV 301


>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
           protein C01C7.1 protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 172 VSQNTSFLEISNNRRDFVIKPNGPIPKNY 258
           +SQ+T+   +S++R+D +  P GP+   Y
Sbjct: 682 ISQSTTLTALSSSRKDPIPAPRGPVAAVY 710


>U41013-3|AAA82302.1|  433|Caenorhabditis elegans Protein kinase
           protein 26 protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 16/76 (21%), Positives = 34/76 (44%)
 Frame = +1

Query: 112 NNLIEAEMEIYFEKEVRIIDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSVENLNG 291
           N+L         +KE+    +  +    ++ +N  DF+++ + P P +   H+     N 
Sbjct: 4   NSLPSEVSNATIDKELYYHGLLPSEDVRQLLSNNGDFLLRSSEPEPGSPRTHILSVMFNN 63

Query: 292 NENDVPVVSRFVLNNV 339
             +D+  +  FV+N V
Sbjct: 64  RLDDINSIKHFVVNFV 79


>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
           non-receptor tyrosinekinase protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 172 VSQNTSFLEISNNRRDFVIKPNGPIPKNY 258
           +SQ+T+   +S++R+D +  P GP+   Y
Sbjct: 682 ISQSTTLTALSSSRKDPIPAPRGPVAAVY 710


>Z82055-5|CAB04847.1|  229|Caenorhabditis elegans Hypothetical
           protein T26H2.5 protein.
          Length = 229

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = +1

Query: 109 YNNLIEAEMEIYFEKEVRIIDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSVENLN 288
           Y   +       FEK+V  +D S++T+F +IS   R      +  I     +H +VE  +
Sbjct: 47  YTRTVYVTFHKTFEKKVVSMDFSESTAFEDISRRARSLFPGSDWRIFSGNPYHSNVEIHS 106

Query: 289 GNE 297
            +E
Sbjct: 107 SSE 109


>L07143-2|AAB37087.3|  437|Caenorhabditis elegans Protein kinase
           protein 31 protein.
          Length = 437

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 15/64 (23%), Positives = 29/64 (45%)
 Frame = +1

Query: 148 EKEVRIIDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSVENLNGNENDVPVVSRFV 327
           EKE     + Q     ++ +N  D+V++ + P P     ++     N   ++   V  FV
Sbjct: 16  EKEAYFHGLIQREDVFQLLDNNGDYVVRLSDPKPGEPRSYILSVMFNNKLDENSSVKHFV 75

Query: 328 LNNV 339
           +N+V
Sbjct: 76  INSV 79


>AF101319-3|AAC69355.1|  331|Caenorhabditis elegans Hypothetical
           protein K08D9.5 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = -2

Query: 222 KVASVVTYFEEAGILRYVNYPNFFFEIYFHFSFNQVVIQTEVNNTLPMFIR 70
           + A  +T+ +   +L  VNYP +  E    F  N+ V        +  F+R
Sbjct: 95  EAAEFITFLDSNDVLFPVNYPTYTQEFAAEFDKNEGVKSISYGRKVHQFVR 145


>AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical
           protein H12I13.3 protein.
          Length = 549

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +1

Query: 73  YKHWQGVVNFGLYNNLIEAEMEIYFEK-EVRIIDVSQNTSFLEISNNRRDFVIKPNGPIP 249
           Y+ +   V    YNN   + +E +F+K   R+I+  + T+ +++  N    +IKP     
Sbjct: 79  YREFHNTVRNTTYNNERGSNIEKFFDKMRNRVINDKKETN-VKVGFNVEIEMIKPGTNET 137

Query: 250 KNYFFHLSVENLNGNEN 300
            N+F  L    L   E+
Sbjct: 138 INFFIQLENSRLLQEED 154


>AF125960-3|AAD14737.1|  446|Caenorhabditis elegans Hypothetical
           protein T12B3.1 protein.
          Length = 446

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +1

Query: 139 IYFEKEVRIIDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSVENLNGNEND 303
           +Y    + +  +  + +F E+ N+ R   IK  GP+P+N  F   + N   N++D
Sbjct: 273 VYIAMRITLQKMYSSVNF-EVENDYR-MKIKCEGPLPENKSFDEQLLNAQLNDDD 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,359,020
Number of Sequences: 27780
Number of extensions: 200252
Number of successful extensions: 617
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)