Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_C13
(576 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 130 1e-31
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 116 3e-27
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 109 2e-25
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 91 1e-19
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 88 8e-19
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 83 3e-17
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 74 2e-14
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 4.5
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 26 4.5
SPAC25B8.02 |||histone deacetylase complex subunit Sds3 |Schizos... 26 4.5
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 4.5
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 25 6.0
SPAC23H4.17c |srb10|prk1, cdk8|cyclin-dependent protein kinase S... 25 7.9
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 130 bits (314), Expect = 1e-31
Identities = 70/183 (38%), Positives = 112/183 (61%), Gaps = 3/183 (1%)
Frame = +2
Query: 26 EECKDFKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGANT-VIEQD 202
+E KE I+++I H I+I+ PT ++ E + +R+PFA++ +NT V+ +
Sbjct: 251 DELNFTKEMILRDIQYHNIRIFFPPTYETDDPESVAENADIMSRIPFAIIASNTFVVNNE 310
Query: 203 GRRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKL--AG 376
G+R+RGR+YPWG+ EV+N EH DF LR M+IRTHL++LK+ T+ + YE YR +L +G
Sbjct: 311 GKRVRGRRYPWGVVEVDNEEHSDFPKLREMLIRTHLEELKEQTNKL-YEAYRTERLLSSG 369
Query: 377 LSHDGRPHRINSNNLCPQGLMNSFMTIWNPLVQMEEEKREHDLKMKTMESELEQVFEMKV 556
+S D H + F + NP ++EEE+ H+ K+ ME+E++ +F KV
Sbjct: 370 ISQD---HSV-------------FREV-NPSAKLEEERALHEEKLMKMEAEMKTIFSQKV 412
Query: 557 REK 565
+EK
Sbjct: 413 QEK 415
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 116 bits (278), Expect = 3e-27
Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Frame = +2
Query: 23 AEECKDFKEQIMKEIGQHKIKIYEFPTSTGEEGEGA-DATRALRARVPFAVVGANTVIEQ 199
A+E + KE I +I +KI +Y+FP E+ E + ++ LRA +PFA+V ++ +IE
Sbjct: 207 AQELQTTKEMINADIEYYKIPVYDFPYDIEEDEEAIINLSQQLRATIPFAIVSSDRLIEM 266
Query: 200 DGRRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKLA 373
+G+ +RGR YPWG+ EV+N H DFLALR+ + TH++DL ++TS+ YE YR KL+
Sbjct: 267 NGQTVRGRAYPWGVVEVDNPRHSDFLALRSALFATHIEDLHNITSNQLYETYRTEKLS 324
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 109 bits (263), Expect = 2e-25
Identities = 52/118 (44%), Positives = 76/118 (64%)
Frame = +2
Query: 26 EECKDFKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGANTVIEQDG 205
EE FK+QI +E +H I +Y + + +E E + A+R +PFAVVG+ I DG
Sbjct: 186 EERAAFKQQIREEFVKHDINLYPYDSDDADEEE-INLNAAVRNLIPFAVVGSEKAIIVDG 244
Query: 206 RRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKLAGL 379
R IRGR+ WG+ V++ HC+F+ LRN ++RTHLQDL + TS HYE +R ++L+ L
Sbjct: 245 RPIRGRQNRWGVVNVDDENHCEFVFLRNFLMRTHLQDLIETTSYYHYEKFRFKQLSSL 302
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 90.6 bits (215), Expect = 1e-19
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 23 AEECKDFKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGANTVIEQD 202
++E FK++++ ++ + KI+ + P + + + +PFA+VGA IE D
Sbjct: 263 SDELNHFKKRVIADMVREKIRYFREPHNE----------KKAKIPIPFAIVGAGAPIEHD 312
Query: 203 GRRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKLAGLS 382
G+ IRGR YPWG+ ++++ + DF LRN ++ TH++ LK T + Y+ +R KL L+
Sbjct: 313 GKCIRGRAYPWGLVDIDDPKQSDFCQLRNFLLYTHIEGLKHKTHKLIYDTFRTEKLVALN 372
Query: 383 HDGRPHRINSNNLCPQGLMNSFMTIWNPLVQ-MEEEKREHDLKMKTMESELE 535
I++ + + + + L + M+E+ RE + ++ +E+ L+
Sbjct: 373 ATPGSQFISAEEMNQKYISEQTQLVEEALTKVMKEKYREKENNLELLETNLK 424
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 88.2 bits (209), Expect = 8e-19
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +2
Query: 26 EECKDFKEQIMKEIGQHKIKIYEFPTSTGE-EGEGADATRALRARVPFAVVGANTVIEQD 202
EE K+FK+ IMK++ Q IK+++FP E E E + + L VPFAV G + +++
Sbjct: 173 EELKNFKDVIMKDLKQCNIKVFDFPWDPEEDEDEVIEDNKRLWESVPFAVSGGVSEEDEE 232
Query: 203 GRRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKLA 373
G + +K+ WG +++ H DFL L+ ++ +HL LK +T +YENYR KL+
Sbjct: 233 GYQRIVKKFQWGTFVIDDPAHSDFLNLKTVLFISHLDILKSITKQTYYENYRTEKLS 289
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 83.0 bits (196), Expect = 3e-17
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 41 FKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGANTVIEQ-DGRRIR 217
+K +I + + H++ +Y+ G+ + +PFA+VG+ I DGR ++
Sbjct: 187 YKTRISQVLEYHQVNVYKPNMDEGDPVFHRQIQGIINC-MPFAIVGSEDDIRTPDGRVVK 245
Query: 218 GRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYR 358
GR+YPWGI E+EN EHCDF LRN++IR+ + DL T YE YR
Sbjct: 246 GREYPWGIVEIENEEHCDFKQLRNILIRSCMLDLIQTTEEKLYEQYR 292
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 73.7 bits (173), Expect = 2e-14
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Frame = +2
Query: 29 ECKDFKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGA-NTVIEQDG 205
E K++I + + I ++ P++ + E A+ L + +P+A++ + N V + DG
Sbjct: 185 ELTQIKQKIRRILEAQSIDVFH-PSTEYSDYETAEL---LDSSLPYAIISSVNEVCKDDG 240
Query: 206 RRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKL----A 373
+ +GR+YPWG +E+ HCDFL L+ ++I H+ +L + T + YE YR +L +
Sbjct: 241 EKSQGRRYPWGTSEIYEETHCDFLKLKKLLINRHMLELINTTETNIYERYRREQLTNRKS 300
Query: 374 GLSHDGRPH--RINSNNLCPQGLMNSFMTIWNPLVQMEEEK 490
G+ + H R+N+ Q + Q +EEK
Sbjct: 301 GIPKLKKEHYERLNNEKRAIQQKITQMTNETESFFQAKEEK 341
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 473 QMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
++E +KRE K K E +L++ + REK A+
Sbjct: 656 ELERQKREEKQKQKEREKKLKKQQQEADREKMAR 689
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/50 (20%), Positives = 23/50 (46%)
Frame = -3
Query: 316 VLKVGPYHHVAECQEITVLQIFHFRDTPRVLPSTYASSVLLYHGVRADDR 167
++ + PY ++ E +++ FH +P Y+ + YH + D +
Sbjct: 102 LVSINPYQNLPEFYNDNLIKHFHKDPEAAKVPHLYSIASSCYHALTTDSK 151
>SPAC25B8.02 |||histone deacetylase complex subunit Sds3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.8 bits (54), Expect = 4.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 32 CKDFKEQIMKEIGQHKIKIYE 94
CK KE ++ + + K KIYE
Sbjct: 98 CKTLKEMVLSHLNEKKRKIYE 118
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 287 CGVPRNHSAPNFPLPRYPKGTSVH 216
CG+ NHS P+FP P + ++H
Sbjct: 12 CGILCNHSVPSFP-PFHSSVANIH 34
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 248 VENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKLAGLSHDGR 394
+EN +H D +AL + + L + + + + ++ +N R + LS R
Sbjct: 1479 IENYDHFDAIALARRLEKHSLLEFRRIAAYIYRKNKRWTQSIELSKQDR 1527
>SPAC23H4.17c |srb10|prk1, cdk8|cyclin-dependent protein kinase
Srb10 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 316 VLKVGPYHHVAECQEITVLQIFHF--RDTPRVLPSTYASSVL 197
+LK G V E E +LQI HF R R +P + S+L
Sbjct: 80 LLKDGTISMVFEYAEHDLLQIIHFHSRSRTRQIPPSILKSIL 121
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,293,640
Number of Sequences: 5004
Number of extensions: 45931
Number of successful extensions: 172
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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