Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_C13
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 130 9e-31
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 97 8e-21
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 97 8e-21
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 97 8e-21
Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical pr... 32 0.25
U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 5.5
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 5.5
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 28 5.5
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 28 5.5
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 5.5
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 5.5
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 5.5
U61948-3|AAB03145.1| 335|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z83105-3|CAB05482.2| 273|Caenorhabditis elegans Hypothetical pr... 27 9.5
U41017-2|AAC48212.1| 97|Caenorhabditis elegans Hypothetical pr... 27 9.5
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 27 9.5
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 130 bits (313), Expect = 9e-31
Identities = 74/189 (39%), Positives = 110/189 (58%), Gaps = 6/189 (3%)
Frame = +2
Query: 26 EECKDFKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGANTVIEQDG 205
+E FK+QI+K+ +IK+Y+FP + A LR +PFA++G+N + E+DG
Sbjct: 202 DELLRFKKQIVKDAETAEIKLYKFPELEDPYTDKV-AIEKLRKALPFAIIGSNMLKEKDG 260
Query: 206 RRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKLAGL-- 379
++IR R+YPWG EVEN++H DFL LR+M+IRT+L D+ DVT +VHYEN+R R++ GL
Sbjct: 261 KKIRYREYPWGTVEVENMQHNDFLTLRDMIIRTNLIDMIDVTRNVHYENFRFRQMEGLPK 320
Query: 380 ---SHDGRPHRINSNNLCPQGLMNSFMTIWNPLVQ-MEEEKREHDLKMKTMESELEQVFE 547
+ D H Q L T+ + K+ D +M +E ELEQ +
Sbjct: 321 NEKNRDPFTHLEEERRQKEQDLDEKRNTLEKVFTEKTSARKKRSDERMSALE-ELEQQNK 379
Query: 548 MKVREKRAK 574
K+ KRA+
Sbjct: 380 QKIDAKRAE 388
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 97.1 bits (231), Expect = 8e-21
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Frame = +2
Query: 32 CKD----FKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGA-NTVIE 196
CKD FK +I+ E+ KI IY FPT ++ + + + VPFAVVG+ + V +
Sbjct: 247 CKDELLRFKAKILSELKSQKIDIYTFPT---DDETVSTTNKEMNKSVPFAVVGSIDFVKK 303
Query: 197 QDGRRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKL 370
++G+ +R R+YPWGI EVEN HCDF+ LR ++RT++ +++ T YENYR +L
Sbjct: 304 ENGQMVRARQYPWGIVEVENESHCDFVKLREALLRTNVDEMRQRTHESLYENYRRDRL 361
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 97.1 bits (231), Expect = 8e-21
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Frame = +2
Query: 32 CKD----FKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGA-NTVIE 196
CKD FK +I+ E+ KI IY FPT ++ + + + VPFAVVG+ + V +
Sbjct: 247 CKDELLRFKAKILSELKSQKIDIYTFPT---DDETVSTTNKEMNKSVPFAVVGSIDFVKK 303
Query: 197 QDGRRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKL 370
++G+ +R R+YPWGI EVEN HCDF+ LR ++RT++ +++ T YENYR +L
Sbjct: 304 ENGQMVRARQYPWGIVEVENESHCDFVKLREALLRTNVDEMRQRTHESLYENYRRDRL 361
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 97.1 bits (231), Expect = 8e-21
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Frame = +2
Query: 32 CKD----FKEQIMKEIGQHKIKIYEFPTSTGEEGEGADATRALRARVPFAVVGA-NTVIE 196
CKD FK +I+ E+ KI IY FPT ++ + + + VPFAVVG+ + V +
Sbjct: 316 CKDELLRFKAKILSELKSQKIDIYTFPT---DDETVSTTNKEMNKSVPFAVVGSIDFVKK 372
Query: 197 QDGRRIRGRKYPWGIAEVENLEHCDFLALRNMVIRTHLQDLKDVTSSVHYENYRCRKL 370
++G+ +R R+YPWGI EVEN HCDF+ LR ++RT++ +++ T YENYR +L
Sbjct: 373 ENGQMVRARQYPWGIVEVENESHCDFVKLREALLRTNVDEMRQRTHESLYENYRRDRL 430
>Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 32.3 bits (70), Expect = 0.25
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +2
Query: 305 HLQDLKDVTSSVHYENYRCRKLAGLSHDGRPHRINSNNLCPQGLMNSFMTIWNPLVQ-ME 481
H Q +K++ + + K + INSNN + L F + ++
Sbjct: 53 HSQYMKELKEAREESDDALAKRQATADSQISELINSNNEAIRELQKKFDEDAAAYDRSIK 112
Query: 482 EEKREHDLKMKTMESELEQVFEMKVREKRAK 574
E REHD KMK M SE + E R R K
Sbjct: 113 ETTREHDQKMKEMRSETREAQEKAERNHREK 143
>Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 32.3 bits (70), Expect = 0.25
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +2
Query: 305 HLQDLKDVTSSVHYENYRCRKLAGLSHDGRPHRINSNNLCPQGLMNSFMTIWNPLVQ-ME 481
H Q +K++ + + K + INSNN + L F + ++
Sbjct: 53 HSQYMKELKEAREESDDALAKRQATADSQISELINSNNEAIRELQKKFDEDAAAYDRSIK 112
Query: 482 EEKREHDLKMKTMESELEQVFEMKVREKRAK 574
E REHD KMK M SE + E R R K
Sbjct: 113 ETTREHDQKMKEMRSETREAQEKAERNHREK 143
>U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical
protein ZC196.3 protein.
Length = 441
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 473 QMEEEKREHDLKMKTMESELEQV-FEMKVR 559
++EE K++ +LK K E+ELEQ+ +MK R
Sbjct: 209 ELEEMKKKRELKKKEFEAELEQIQSQMKNR 238
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 323 PSSPEGGSVSPCCGVPRNHSAPNFPLPRYP 234
P +P+ G SP P H +P++P P YP
Sbjct: 345 PETPDSGYPSPAPQEPA-HPSPSYPSPSYP 373
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 470 VQMEEEKREHDLKMKTMESELEQVFEMKVREKRAK 574
+Q E+EK+E DLK E + E+ + + EK K
Sbjct: 129 IQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
>U61948-3|AAB03145.1| 335|Caenorhabditis elegans Hypothetical
protein C46A5.5 protein.
Length = 335
Score = 27.5 bits (58), Expect = 7.2
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Frame = +2
Query: 239 IAEVENLEHCDFLALRNMVIRTHLQDLKD-VTSSVHYE---NYRCRKLAGLSHDGRPHRI 406
I + E+ HC LA V+R D+ D ++ + N + + + D P I
Sbjct: 4 ITDDEDWFHCGVLAFSLEVVRQKNSDIDDRISVDEDFSSPINIKLSETQQMIIDEEPEEI 63
Query: 407 NSNNLCPQGLMNSFM---TIWNPLVQMEEEKREHDLKMKTMESELEQVFEMKVREKRA 571
+++ + P + F+ L +E E++E +K K ES+ +++ + K R+K A
Sbjct: 64 DADVVTPNFSNDHFLQPRRCSMRLAVLEIERQETAMKKKE-ESKRQKIKKTKERKKHA 120
>Z83105-3|CAB05482.2| 273|Caenorhabditis elegans Hypothetical
protein F14H3.3 protein.
Length = 273
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 308 LQDLKDVTSSVHYENYRCRKLAGLSHDGRPHR----INSNNLCPQGLMNSFMTIWNPLVQ 475
L+ + +T S+ +E +C + ++ + H+ I + L Q L + + + P
Sbjct: 126 LRRCQKITESLPFEQEQCIRNIQ-EYEAKVHQLQMDIRGHELVIQQLKSQIIEVGRPNRI 184
Query: 476 MEEEKREHDLKMKTMESELEQVFEMKVREKR 568
++EE +E L ++T + + ++ E EKR
Sbjct: 185 LDEELQERKLDIETCQDQELRMSEFIEEEKR 215
>U41017-2|AAC48212.1| 97|Caenorhabditis elegans Hypothetical
protein T26C11.3 protein.
Length = 97
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 LGYRGSGKFGA-L*FLGTPQHGDTDPPSGLEGRDQFRAL*ELS 357
L +RG G GA L + T QH T PPS E + ++L E++
Sbjct: 52 LFFRGIGAPGAALLIISTSQHQCTVPPSNYEPSELSKSLLEIA 94
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 323 PSSPEGGSVSPCC-GVPRNHSAPNFPLPRYPKG 228
P P G S P G+P +AP P P+ PKG
Sbjct: 158 PPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPKG 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,015,187
Number of Sequences: 27780
Number of extensions: 276551
Number of successful extensions: 1066
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -