Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_C10
(544 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U83194-1|AAD24202.1| 410|Homo sapiens TRAF4-associated factor 2... 54 3e-07
BC001798-1|AAH01798.1| 290|Homo sapiens SNX6 protein protein. 54 3e-07
AF121856-1|AAD27829.1| 406|Homo sapiens sorting nexin 6 protein. 54 3e-07
AF109364-1|AAQ13512.1| 216|Homo sapiens MSTP010 protein. 54 3e-07
BC093980-1|AAH93980.1| 404|Homo sapiens sorting nexin 5 protein. 48 2e-05
BC093623-1|AAH93623.1| 404|Homo sapiens sorting nexin 5 protein. 48 2e-05
BC062638-1|AAH62638.1| 412|Homo sapiens SNX5 protein protein. 48 2e-05
AL121585-2|CAC00471.1| 404|Homo sapiens sorting nexin 5 protein. 48 2e-05
AK223308-1|BAD97028.1| 404|Homo sapiens sorting nexin 5 variant... 48 2e-05
AK001793-1|BAA91914.1| 404|Homo sapiens protein ( Homo sapiens ... 48 2e-05
AF121855-1|AAD27828.1| 404|Homo sapiens sorting nexin 5 protein. 48 2e-05
BC045563-1|AAH45563.1| 403|Homo sapiens hypothetical protein FL... 43 6e-04
BC040981-1|AAH40981.1| 403|Homo sapiens hypothetical protein FL... 43 8e-04
X63465-1|CAA45067.1| 558|Homo sapiens smg GDS protein. 31 2.6
BC099845-1|AAH99845.1| 559|Homo sapiens RAP1GDS1 protein protein. 31 2.6
BC099708-1|AAH99708.1| 558|Homo sapiens RAP1GDS1 protein protein. 31 2.6
BC098334-1|AAH98334.1| 558|Homo sapiens RAP1GDS1 protein protein. 31 2.6
AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein prot... 31 2.6
M22431-1|AAA36549.1| 144|Homo sapiens protein ( Human RASF-A PL... 29 8.0
M22430-1|AAA36550.1| 144|Homo sapiens protein ( Human RASF-A PL... 29 8.0
CR456865-1|CAG33146.1| 144|Homo sapiens PLA2G2A protein. 29 8.0
BC005919-1|AAH05919.1| 144|Homo sapiens phospholipase A2, group... 29 8.0
AY656696-1|AAT73044.1| 144|Homo sapiens platelet phospholipase ... 29 8.0
AY656695-1|AAT73043.1| 144|Homo sapiens platelet phospholipase ... 29 8.0
AY462114-1|AAR16084.1| 144|Homo sapiens phospholipase A2, group... 29 8.0
AL358253-2|CAH74017.1| 144|Homo sapiens phospholipase A2, group... 29 8.0
>U83194-1|AAD24202.1| 410|Homo sapiens TRAF4-associated factor 2
protein.
Length = 410
Score = 54.0 bits (124), Expect = 3e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 96 VQAEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
+QAE +Q C KFE++S A++ELIDF+TRRVAAFRK
Sbjct: 342 LQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRK 379
>BC001798-1|AAH01798.1| 290|Homo sapiens SNX6 protein protein.
Length = 290
Score = 54.0 bits (124), Expect = 3e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 96 VQAEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
+QAE +Q C KFE++S A++ELIDF+TRRVAAFRK
Sbjct: 222 LQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRK 259
>AF121856-1|AAD27829.1| 406|Homo sapiens sorting nexin 6 protein.
Length = 406
Score = 54.0 bits (124), Expect = 3e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 96 VQAEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
+QAE +Q C KFE++S A++ELIDF+TRRVAAFRK
Sbjct: 338 LQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRK 375
>AF109364-1|AAQ13512.1| 216|Homo sapiens MSTP010 protein.
Length = 216
Score = 54.0 bits (124), Expect = 3e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 96 VQAEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
+QAE +Q C KFE++S A++ELIDF+TRRVAAFRK
Sbjct: 148 LQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRK 185
>BC093980-1|AAH93980.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C KFEQ+S A+EELI+F+ +RVAAFRK
Sbjct: 339 AEAHQQECCQKFEQLSESAKEELINFKRKRVAAFRK 374
>BC093623-1|AAH93623.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C KFEQ+S A+EELI+F+ +RVAAFRK
Sbjct: 339 AEAHQQECCQKFEQLSESAKEELINFKRKRVAAFRK 374
>BC062638-1|AAH62638.1| 412|Homo sapiens SNX5 protein protein.
Length = 412
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C KFEQ+S A+EELI+F+ +RVAAFRK
Sbjct: 347 AEAHQQECCQKFEQLSESAKEELINFKRKRVAAFRK 382
>AL121585-2|CAC00471.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C KFEQ+S A+EELI+F+ +RVAAFRK
Sbjct: 339 AEAHQQECCQKFEQLSESAKEELINFKRKRVAAFRK 374
>AK223308-1|BAD97028.1| 404|Homo sapiens sorting nexin 5 variant
protein.
Length = 404
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C KFEQ+S A+EELI+F+ +RVAAFRK
Sbjct: 339 AEAHQQECCQKFEQLSESAKEELINFKRKRVAAFRK 374
>AK001793-1|BAA91914.1| 404|Homo sapiens protein ( Homo sapiens
cDNA FLJ10931 fis, clone OVARC1000564. ).
Length = 404
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C KFEQ+S A+EELI+F+ +RVAAFRK
Sbjct: 339 AEAHQQECCQKFEQLSESAKEELINFKRKRVAAFRK 374
>AF121855-1|AAD27828.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 48.0 bits (109), Expect = 2e-05
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C KFEQ+S A+EELI+F+ +RVAAFRK
Sbjct: 339 AEAHQQECCQKFEQLSESAKEELINFKRKRVAAFRK 374
>BC045563-1|AAH45563.1| 403|Homo sapiens hypothetical protein
FLJ30934 protein.
Length = 403
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C +FE++S A++EL+DF++RRV++FRK
Sbjct: 337 AESHQQLCCQRFERLSDSAKQELMDFKSRRVSSFRK 372
>BC040981-1|AAH40981.1| 403|Homo sapiens hypothetical protein
FLJ30934 protein.
Length = 403
Score = 42.7 bits (96), Expect = 8e-04
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +3
Query: 102 AEQAQAHACAKFEQVSARAREELIDFRTRRVAAFRK 209
AE Q C +FE++S A++EL+DF++RRV++FRK
Sbjct: 337 AESHQQLCCQRFERLSDYAKQELMDFKSRRVSSFRK 372
>X63465-1|CAA45067.1| 558|Homo sapiens smg GDS protein.
Length = 558
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 377 KTGSSSGKMCYTCHSF--GVCNVKIFVLFTKLLRVYTDTYNKNITFVCLYVPGNL 535
+TG + G +CY HS + N+ + KLL ++ N +T +CL GNL
Sbjct: 108 QTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQ--NAALTEMCLVAFGNL 160
>BC099845-1|AAH99845.1| 559|Homo sapiens RAP1GDS1 protein protein.
Length = 559
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 377 KTGSSSGKMCYTCHSF--GVCNVKIFVLFTKLLRVYTDTYNKNITFVCLYVPGNL 535
+TG + G +CY HS + N+ + KLL ++ N +T +CL GNL
Sbjct: 109 QTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQ--NAALTEMCLVAFGNL 161
>BC099708-1|AAH99708.1| 558|Homo sapiens RAP1GDS1 protein protein.
Length = 558
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 377 KTGSSSGKMCYTCHSF--GVCNVKIFVLFTKLLRVYTDTYNKNITFVCLYVPGNL 535
+TG + G +CY HS + N+ + KLL ++ N +T +CL GNL
Sbjct: 108 QTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQ--NAALTEMCLVAFGNL 160
>BC098334-1|AAH98334.1| 558|Homo sapiens RAP1GDS1 protein protein.
Length = 558
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 377 KTGSSSGKMCYTCHSF--GVCNVKIFVLFTKLLRVYTDTYNKNITFVCLYVPGNL 535
+TG + G +CY HS + N+ + KLL ++ N +T +CL GNL
Sbjct: 108 QTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQ--NAALTEMCLVAFGNL 160
>AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein
protein.
Length = 1099
Score = 31.1 bits (67), Expect = 2.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 138 RTWHRHAPGPVPPEHTIIN 82
RTWH+H PGP P + N
Sbjct: 66 RTWHKHGPGPTPDVKPVQN 84
>M22431-1|AAA36549.1| 144|Homo sapiens protein ( Human RASF-A PLA2
gene encoding synovial phospholipase, exons 2 through 5.
).
Length = 144
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 253 RCRKNDCIKKFIIYHFLKAATRLVRKSMSSSRARADTCSNLAQAC 119
R K C KF+ Y F + +R+ S R++ C A C
Sbjct: 73 RLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATC 117
>M22430-1|AAA36550.1| 144|Homo sapiens protein ( Human RASF-A PLA2
mRNA, complete cds. ).
Length = 144
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 253 RCRKNDCIKKFIIYHFLKAATRLVRKSMSSSRARADTCSNLAQAC 119
R K C KF+ Y F + +R+ S R++ C A C
Sbjct: 73 RLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATC 117
>CR456865-1|CAG33146.1| 144|Homo sapiens PLA2G2A protein.
Length = 144
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 253 RCRKNDCIKKFIIYHFLKAATRLVRKSMSSSRARADTCSNLAQAC 119
R K C KF+ Y F + +R+ S R++ C A C
Sbjct: 73 RLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATC 117
>BC005919-1|AAH05919.1| 144|Homo sapiens phospholipase A2, group
IIA (platelets, synovial fluid) protein.
Length = 144
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 253 RCRKNDCIKKFIIYHFLKAATRLVRKSMSSSRARADTCSNLAQAC 119
R K C KF+ Y F + +R+ S R++ C A C
Sbjct: 73 RLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATC 117
>AY656696-1|AAT73044.1| 144|Homo sapiens platelet phospholipase A2
protein.
Length = 144
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 253 RCRKNDCIKKFIIYHFLKAATRLVRKSMSSSRARADTCSNLAQAC 119
R K C KF+ Y F + +R+ S R++ C A C
Sbjct: 73 RLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATC 117
>AY656695-1|AAT73043.1| 144|Homo sapiens platelet phospholipase A2
protein.
Length = 144
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 253 RCRKNDCIKKFIIYHFLKAATRLVRKSMSSSRARADTCSNLAQAC 119
R K C KF+ Y F + +R+ S R++ C A C
Sbjct: 73 RLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATC 117
>AY462114-1|AAR16084.1| 144|Homo sapiens phospholipase A2, group
IIA (platelets, synovial fluid) protein.
Length = 144
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 253 RCRKNDCIKKFIIYHFLKAATRLVRKSMSSSRARADTCSNLAQAC 119
R K C KF+ Y F + +R+ S R++ C A C
Sbjct: 73 RLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATC 117
>AL358253-2|CAH74017.1| 144|Homo sapiens phospholipase A2, group
IIA (platelets, synovial fluid) protein.
Length = 144
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 253 RCRKNDCIKKFIIYHFLKAATRLVRKSMSSSRARADTCSNLAQAC 119
R K C KF+ Y F + +R+ S R++ C A C
Sbjct: 73 RLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATC 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,643,174
Number of Sequences: 237096
Number of extensions: 1923409
Number of successful extensions: 3681
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3681
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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