Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_C09
(559 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 236 1e-62
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 196 7e-51
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 194 4e-50
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 52 3e-07
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 50 1e-06
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 49 3e-06
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 49 3e-06
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 35 0.051
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 35 0.051
11_06_0254 - 21721667-21721718,21722025-21722647 31 0.82
01_06_1179 - 35161229-35162368 30 1.4
01_05_0714 + 24555494-24555637,24555884-24556071,24556195-245562... 30 1.4
02_01_0433 + 3153802-3154064,3154149-3154713 29 1.9
01_05_0519 - 22897277-22897986,22898126-22898225 29 1.9
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385... 29 2.5
01_01_0437 - 3293624-3294029,3294094-3294212 29 2.5
03_06_0715 + 35693002-35694585 29 3.3
11_01_0750 - 6315126-6315896,6316371-6316784 28 5.8
11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 28 5.8
08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497 28 5.8
08_01_0139 + 1105857-1107008,1107124-1107328,1107583-1107768,110... 27 7.7
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 27 7.7
04_04_0620 + 26656072-26656417,26656585-26657396 27 7.7
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 27 7.7
03_05_0223 - 22087076-22087340,22087448-22087726,22087808-220879... 27 7.7
02_04_0134 - 20109610-20109984 27 7.7
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 236 bits (577), Expect = 1e-62
Identities = 110/182 (60%), Positives = 145/182 (79%)
Frame = +3
Query: 12 RFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETEAVRKE 191
RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE +A +KE
Sbjct: 46 RFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKE 105
Query: 192 RLKKAAEANVAKKDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPA 371
RL K A+A K K+P ++ G N VT L+E+ KAQLVVIAHDVDPIELV++LPA
Sbjct: 106 RLLKRAQAEAEGKTVEA-KKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPA 164
Query: 372 LCRKMGVPYCIVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEE 551
LCRKM VPYCIVKGK+RLG++VH+KT + + LT V++ D+ FSK++EAIK NFN++++E
Sbjct: 165 LCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDE 224
Query: 552 LR 557
+R
Sbjct: 225 VR 226
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 196 bits (479), Expect = 7e-51
Identities = 99/182 (54%), Positives = 133/182 (73%)
Frame = +3
Query: 12 RFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETEAVRKE 191
RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLDK +KE
Sbjct: 47 RFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLDKNLG----------------CQKE 90
Query: 192 RLKKAAEANVAKKDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPA 371
RL K A+A K K+P ++ G + VT L+E+ KAQLVVIAHDVDPIELV++LPA
Sbjct: 91 RLLKRAQAEAEGKTVEA-KKPIVVKYGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPA 149
Query: 372 LCRKMGVPYCIVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEE 551
LCRKM +PYCIVKGK+RLG++VH+KT + + LT V++ D+ FSK++EAIK+NFN++++E
Sbjct: 150 LCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKSNFNDKFDE 209
Query: 552 LR 557
+R
Sbjct: 210 VR 211
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 194 bits (473), Expect = 4e-50
Identities = 98/182 (53%), Positives = 132/182 (72%)
Frame = +3
Query: 12 RFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETEAVRKE 191
RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE +A +KE
Sbjct: 30 RFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKE 89
Query: 192 RLKKAAEANVAKKDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPA 371
RL K A+A A+ K+P ++ G N VT L+E+ KAQLVVIAHDVDPIELV++LPA
Sbjct: 90 RLLKRAQAE-AEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPA 148
Query: 372 LCRKMGVPYCIVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEE 551
LCRKM +VH+KT + + LT V++ D+ FSK++EAIK NFN++++E
Sbjct: 149 LCRKM--------------EIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDE 194
Query: 552 LR 557
+R
Sbjct: 195 VR 196
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +3
Query: 261 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GAL 434
L+ G V K + + + L +IA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGT 104
Query: 435 VHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEEL 554
R TC + LT G+ V E +KT++++ E+
Sbjct: 105 TKRPTCCVLVLTKPAKGELE--EDVKEKLKTDYDQVMSEV 142
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +3
Query: 261 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 428
L+ G N TK + + A+ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALG 88
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 261 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 428
L+ G N TK + + ++ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALG 90
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 261 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GAL 434
L+ G V K + + L VIA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGT 104
Query: 435 VHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEEL 554
R TC + +T G+ +V E +K++++ E+
Sbjct: 105 TKRPTCCVLVMTKPAKGE--INEEVKEKLKSDYDHVVAEV 142
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 270 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 428
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 270 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 428
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>11_06_0254 - 21721667-21721718,21722025-21722647
Length = 224
Score = 30.7 bits (66), Expect = 0.82
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 87 PPINQFTQTLDKTTAKGLFKILEKYRPETEAVRKERLKKAAEANVAKKDEPPPKRPNTLR 266
PP++ F Q +K A ++ +RPE V +E +++ A + P +PN +
Sbjct: 98 PPMSGFAQEAEKERAGMSSTVMNGFRPEKVPVYRELVREFAVCDRWFASVPTSTQPNRMF 157
Query: 267 AGTNTVTKLVEKKKAQL 317
+ T LV QL
Sbjct: 158 VHSATSHGLVSNDGKQL 174
>01_06_1179 - 35161229-35162368
Length = 379
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 120 KTTAKGLFKILEKYRPETEAVRKERLKKAAEAN--VAKKDEPPPKRPNTLRAGTNTVTK 290
+ +AK +LE+ +P RLK A VAKK +PPP P TK
Sbjct: 247 RASAKKPTTLLEQSKPRRSVSSARRLKTRANTPRIVAKKSKPPPPPPPAAARSPAPTTK 305
>01_05_0714 +
24555494-24555637,24555884-24556071,24556195-24556280,
24556359-24556461,24556798-24557000,24557077-24557681,
24557784-24557918,24558040-24558067,24559517-24559596,
24559873-24559975,24560553-24560635,24560915-24561017,
24561596-24561720,24562001-24562103,24562647-24562726,
24563322-24563429,24563521-24563565
Length = 773
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Frame = +3
Query: 72 RLKVPPPINQFTQTLDKTTAKGL------FKILEKYRPETEAVRKERLKKAAEANVAKKD 233
RLK PP N+ Q +D T + F LEK + +++ R + E +
Sbjct: 103 RLKTKPPANKPVQNVDYTELLNIEDPDEYFLTLEKLERADKEIKRLRGEVPTEGTYNNRG 162
Query: 234 -EPPPKRPNTLR 266
EPP RP LR
Sbjct: 163 IEPPKLRPGLLR 174
>02_01_0433 + 3153802-3154064,3154149-3154713
Length = 275
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 45 QRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETEAVRKERLKKAAEANVA 224
Q + + +R P PIN +K K L +ILEK+ E + +R+++ A V
Sbjct: 39 QSEMSKEDQRTSKPVPINSTMNKEEKWLDKSLDRILEKF----EQMEAKRMQEEATTAVL 94
Query: 225 KKDEP-PPKRPNT 260
K P P P T
Sbjct: 95 KATSPTAPMAPPT 107
>01_05_0519 - 22897277-22897986,22898126-22898225
Length = 269
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 165 PETEAVRKERLKKAAEANVAKKDEPPPKRPNTLRAGTNTVTKLVEKKK 308
P+ ++ KKA E +VA K PPP + ++ ++ T EKK+
Sbjct: 104 PKANQEEEKETKKADEHDVAGKPPPPPPKTDSDQSERRTQLSAREKKE 151
>10_08_0452 -
18038182-18038253,18038338-18038415,18038502-18038579,
18039112-18039168,18039276-18039349,18039424-18039495,
18039609-18039670,18039861-18039962,18040378-18040490,
18040809-18040940,18041156-18041243,18041617-18041711,
18041793-18042023,18042567-18042680,18042765-18042866,
18043091-18043207,18043301-18044146
Length = 810
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 204 AAEANVAKKDEPPPKRPNTLRAGTNTVTKL--VEKKK 308
AA A K++P PK+P TL A ++T + VEK+K
Sbjct: 93 AAGAKPEAKEKPSPKKPKTLGAKSDTKSSAEGVEKEK 129
>01_01_0437 - 3293624-3294029,3294094-3294212
Length = 174
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 237 PPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVD 341
PPP + R GT+++ + KA++ VI HD +
Sbjct: 34 PPPPQQQAARKGTHSLEGVKPLPKAEVSVICHDAN 68
>03_06_0715 + 35693002-35694585
Length = 527
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = +3
Query: 87 PPINQFTQTLDKTTAKGLFKILEKYRPETEAVRKERLKKAAEANVAKKDEPPPKRPNTLR 266
PP+ F Q +K ++ +RPE V +E +++ A + P +PN L
Sbjct: 103 PPMAGFAQQAEKEKPGMADTVMNGFRPEAVPVYRELVRQFAVCDRWFASNPASTQPNRLF 162
Query: 267 AGTNTVTKLVEKKKAQLV 320
+ T LV LV
Sbjct: 163 VHSATSHGLVSNDTKLLV 180
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 437 YKRTQS*FTLHDTVRDSHLTAKRWQEEHKFDWVYVMSDDH 318
Y RT+ F +HD + L K+ + E KF + DDH
Sbjct: 214 YDRTRL-FAVHDNFKVIKLPYKQGKNERKFSMYIFLPDDH 252
>11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610
Length = 439
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = -1
Query: 490 RSPDSTFVRATLVQVLRCTSAPNRDLPFTIQYGTPILRQSAGRKSTSSIGSTS*AMTTSC 311
R P+ + A +R T D P T++YGT ++G+ S+ GST+ T S
Sbjct: 54 RKPEQVHISAVGSDKMRVTWITGGDAPATVEYGT-----TSGQYPFSATGSTN---TYSY 105
Query: 310 AFFFSTSLVTVLV 272
+ S ++ V++
Sbjct: 106 VLYHSGNIHDVVI 118
>08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497
Length = 369
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 67 SVVSKCRRQSTSSPRH*IKPQPKVCSRSWRNTGQKLRQSGKS 192
+++ +R S++ K QP C+RSW G+ +Q G++
Sbjct: 74 TMIEDLKRSSSADTMEQTK-QPLSCARSWSTCGKSSKQRGRN 114
>08_01_0139 +
1105857-1107008,1107124-1107328,1107583-1107768,
1107924-1108133,1108552-1109186
Length = 795
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 378 RKMGVPYCIVKGKSRLGALVHRKTCTSV 461
R + P I+K +R+ A +H +TC+SV
Sbjct: 87 RLVNSPINIIKANARVKAALHNQTCSSV 114
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 174 EAVRKERLKKAAEANVAKKDEPPPKRPNTLRAGTNTVTKLVEKKKAQ 314
E R E LKK E A K+E KR A V ++ KK +
Sbjct: 153 EKARLEELKKQRELAAATKEEEKKKREEAKAAAAARVQAKLDAKKGK 199
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 234 EPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDP 344
+PP P + A + +VE KKAQ++ + H +DP
Sbjct: 344 QPPRPPPMSFVAEHPFMFAIVEYKKAQVLFLGHVMDP 380
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 418 DLPFTIQYGTPILRQSAGRKSTSSIGS 338
D+PF Y P++R + GRK + S+G+
Sbjct: 670 DVPFEKVYLHPMIRDAHGRKMSKSLGN 696
>03_05_0223 -
22087076-22087340,22087448-22087726,22087808-22087950,
22088029-22088133,22088272-22088465,22088561-22088753,
22088893-22089202,22089335-22089558,22089862-22089990,
22090019-22090078,22090426-22090617,22091463-22091522,
22091606-22091688,22092473-22092611,22092949-22093083,
22093187-22093462
Length = 928
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 42 IQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETEAVRKERLKK 203
+ + LQ R + P PI Q ++ KGL Y P+ E + +++KK
Sbjct: 814 VHASRQPLQMRKQKPEPIRQLNPKFEENYIKGL-----DYDPDRERAQMKKMKK 862
>02_04_0134 - 20109610-20109984
Length = 124
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 191 ASKESRRSQCC*ER*AATEKAKHPTRWNQHCYQAC*EEEGTACGHRS*RRP 343
A+ + R Q C E+ AA + + RW + C C + + C RRP
Sbjct: 15 AASRAERRQACSEQGAAKQARRLERRWAKQC--GCRQPQSEWCVANQCRRP 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,667,923
Number of Sequences: 37544
Number of extensions: 350003
Number of successful extensions: 1259
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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