Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_C07
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 165 8e-41
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 165 8e-41
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 165 8e-41
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 165 8e-41
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 165 8e-41
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 162 6e-40
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 117 3e-26
X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a pr... 38 0.016
AF209878-1|AAF40147.1| 98|Homo sapiens immunoglobulin heavy ch... 36 0.11
AK001004-1|BAA91464.1| 304|Homo sapiens protein ( Homo sapiens ... 30 5.5
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 29 9.5
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 165 bits (401), Expect = 8e-41
Identities = 78/111 (70%), Positives = 88/111 (79%)
Frame = +2
Query: 167 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 346
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 347 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNLPAQAMGHRIRVMLYPSRI 499
GK K R IWGKVTR HGNSG VRA+F+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 165 bits (401), Expect = 8e-41
Identities = 78/111 (70%), Positives = 88/111 (79%)
Frame = +2
Query: 167 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 346
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 347 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNLPAQAMGHRIRVMLYPSRI 499
GK K R IWGKVTR HGNSG VRA+F+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 165 bits (401), Expect = 8e-41
Identities = 78/111 (70%), Positives = 88/111 (79%)
Frame = +2
Query: 167 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 346
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 347 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNLPAQAMGHRIRVMLYPSRI 499
GK K R IWGKVTR HGNSG VRA+F+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 165 bits (401), Expect = 8e-41
Identities = 78/111 (70%), Positives = 88/111 (79%)
Frame = +2
Query: 167 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 346
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 347 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNLPAQAMGHRIRVMLYPSRI 499
GK K R IWGKVTR HGNSG VRA+F+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 165 bits (401), Expect = 8e-41
Identities = 78/111 (70%), Positives = 88/111 (79%)
Frame = +2
Query: 167 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 346
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 347 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNLPAQAMGHRIRVMLYPSRI 499
GK K R IWGKVTR HGNSG VRA+F+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 162 bits (394), Expect = 6e-40
Identities = 77/111 (69%), Positives = 87/111 (78%)
Frame = +2
Query: 167 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 346
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 347 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNLPAQAMGHRIRVMLYPSRI 499
GK K R IWGKVTR HGNSG V A+F+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVLAKFRSNLPAKAIGHRIRVMLYPSRI 110
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 117 bits (281), Expect = 3e-26
Identities = 58/97 (59%), Positives = 68/97 (70%)
Frame = +2
Query: 167 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 346
GRL++K+ F GYKR L+NQ E+TALLKIEG + + FY GKRC VY+AK T IPG
Sbjct: 2 GRLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG- 60
Query: 347 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNLPAQA 457
K K R IWGKVTR H NSG V A+F SNLPA+A
Sbjct: 61 --SKPNKSRVIWGKVTRAHRNSGMVAAKFHSNLPAKA 95
>X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a
protein.
Length = 21
Score = 38.3 bits (85), Expect = 0.016
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 167 GRLYAKAVFTGYKRGLRNQ 223
GRL++KA+F GYKRGLRNQ
Sbjct: 3 GRLWSKAIFAGYKRGLRNQ 21
>AF209878-1|AAF40147.1| 98|Homo sapiens immunoglobulin heavy chain
variable region 194-118 protein.
Length = 98
Score = 35.5 bits (78), Expect = 0.11
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 463 SHGLRWQVRLEPGTDTTGVAMRAGHLAPDCTKLSFLATWTPGDRRPF 323
+H L+ +V + T T+ M L P+ T + F AT TPGD PF
Sbjct: 42 AHKLQGRVTMTTDTSTSTAYMELRSLTPEDTSVYFCATRTPGDGWPF 88
>AK001004-1|BAA91464.1| 304|Homo sapiens protein ( Homo sapiens
cDNA FLJ10142 fis, clone HEMBA1003257. ).
Length = 304
Score = 29.9 bits (64), Expect = 5.5
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 468 LCPMACAGRLDLNLARTPPELPCGRVTLPQIARSLVFLP 352
LC C L P LP GRV PQ+ V LP
Sbjct: 126 LCKTNCGVCCKAELGLAPSALPAGRVIKPQVINQAVGLP 164
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 29.1 bits (62), Expect = 9.5
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 389 PCPRLHEA*FSCHVDPRGSASFSLHGRHTRNACQHRKVHHCDPL 258
P PRLH D ++S H HT N H + H DPL
Sbjct: 376 PQPRLHSHPLLQPRDGTHASSVDQHNHHTHNHHTHNQWLHGDPL 419
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,254,104
Number of Sequences: 237096
Number of extensions: 1895599
Number of successful extensions: 5608
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5601
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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