Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_C04
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 28 5.1
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 27 6.7
U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical pr... 27 6.7
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 27 6.7
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 27 8.9
Z82092-2|CAB05011.1| 212|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 27 8.9
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 27 8.9
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 27 8.9
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 27 8.9
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 27 8.9
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 8.9
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 112 SPVPQLSTRFAYPQHVPL--ISQAPSSVRTHNSPQYYSNSLPASQESQVAQER 264
S PQ+ R A Q P+ SQ P+ HN Y N +P +E + +++
Sbjct: 1216 SATPQVK-RIALSQSSPVQRFSQHPNGTLPHNLAVVYQNKMPQDREKLLQEQQ 1267
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 294 FKGVWFFCEFPLLGYLAFL*RWQGVAVILRTVMRS 190
F V+FFC FPLL + + W V ++ ++ S
Sbjct: 11 FSYVFFFCSFPLLPFSSNT-NWSNVCKFIKVIVGS 44
>U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical
protein T19B4.5 protein.
Length = 400
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 305 LDDLDEIQNEFHL*RGFLVVKYARYDNANALSTLPLRDRLR 427
L + D Q+E+H G L++ R + AN+ T R+R R
Sbjct: 225 LQEADFSQDEYHQYLGMLIMDLERSNEANSTLTTYYRERQR 265
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 410 VAGLIMHLHYHTEHI*PRETPVRDGIRFEFHRDRLVLLSSRAFGF 276
+AG H ++ R P D +F F + V+ SSRAFGF
Sbjct: 266 IAGKDREAHVISKDKFTRNAPAVDFDKFPFTDEDSVVTSSRAFGF 310
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 151 QHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNA 288
Q VP+I QAP + Q +++ PA Q + Q+ + A+K A
Sbjct: 18 QQVPVIQQAPPNSPAQQQQQAQAHAPPA-QAKPIVQQTQPAQKQQA 62
>Z82092-2|CAB05011.1| 212|Caenorhabditis elegans Hypothetical
protein ZK384.2 protein.
Length = 212
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 79 TTQHVGCSLSLSPVPQLSTRFAYPQHVPLISQAPSSVRTHNSPQY 213
TT+HVGC +++ + F Y V +I + S H P Y
Sbjct: 147 TTRHVGCGVNICDAEK--NLFGYRNKVVVICEYQSKGNIHGLPIY 189
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 73 CVTTQHVGCSLSLSPVPQLSTRFAYPQHVPLISQAPSSVRTHNSPQYYS-NSLP 231
C T+ + L L +PQ ++ A P S A SS H+ P Y+S NSLP
Sbjct: 45 CPTSTTLVRQLYLPQIPQSASFAAAPTS---FSGASSSSSNHHHPVYHSQNSLP 95
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 73 CVTTQHVGCSLSLSPVPQLSTRFAYPQHVPLISQAPSSVRTHNSPQYYS-NSLP 231
C T+ + L L +PQ ++ A P S A SS H+ P Y+S NSLP
Sbjct: 45 CPTSTTLVRQLYLPQIPQSASFAAAPTS---FSGASSSSSNHHHPVYHSQNSLP 95
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 73 CVTTQHVGCSLSLSPVPQLSTRFAYPQHVPLISQAPSSVRTHNSPQYYS-NSLP 231
C T+ + L L +PQ ++ A P S A SS H+ P Y+S NSLP
Sbjct: 45 CPTSTTLVRQLYLPQIPQSASFAAAPTS---FSGASSSSSNHHHPVYHSQNSLP 95
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 73 CVTTQHVGCSLSLSPVPQLSTRFAYPQHVPLISQAPSSVRTHNSPQYYS-NSLP 231
C T+ + L L +PQ ++ A P S A SS H+ P Y+S NSLP
Sbjct: 45 CPTSTTLVRQLYLPQIPQSASFAAAPTS---FSGASSSSSNHHHPVYHSQNSLP 95
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 73 CVTTQHVGCSLSLSPVPQLSTRFAYPQHVPLISQAPSSVRTHNSPQYYS-NSLP 231
C T+ + L L +PQ ++ A P S A SS H+ P Y+S NSLP
Sbjct: 45 CPTSTTLVRQLYLPQIPQSASFAAAPTS---FSGASSSSSNHHHPVYHSQNSLP 95
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 73 CVTTQHVGCSLSLSPVPQLSTRFAYPQHVPLISQAPSSVRTHNSPQYYS-NSLP 231
C T+ + L L +PQ ++ A P S A SS H+ P Y+S NSLP
Sbjct: 45 CPTSTTLVRQLYLPQIPQSASFAAAPTS---FSGASSSSSNHHHPVYHSQNSLP 95
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +1
Query: 88 HVGCSLSLSPVPQLSTRFAYPQHVPL--ISQAPSSVRTHNSPQYYSNSLPASQ--ESQVA 255
H+ ++ VP ++ F Q ++QAP S +PQ + S P +Q +S +A
Sbjct: 398 HMSAPTKITAVPNVAAGFHQNQQQLYSDMAQAPQSTPIRTTPQPGTGSAPQAQTPQSHLA 457
Query: 256 QERKFAEKPN 285
Q +F N
Sbjct: 458 QLGQFVNGAN 467
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +1
Query: 88 HVGCSLSLSPVPQLSTRFAYPQHVPL--ISQAPSSVRTHNSPQYYSNSLPASQ--ESQVA 255
H+ ++ VP ++ F Q ++QAP S +PQ + S P +Q +S +A
Sbjct: 1777 HMSAPTKITAVPNVAAGFHQNQQQLYSDMAQAPQSTPIRTTPQPGTGSAPQAQTPQSHLA 1836
Query: 256 QERKFAEKPN 285
Q +F N
Sbjct: 1837 QLGQFVNGAN 1846
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 73 CVTTQHVGCSLSLSPVPQLSTRFAYPQHVPLISQAPSSVRTHNSPQYYS-NSLP 231
C T+ + L L +PQ ++ A P S A SS H+ P Y+S NSLP
Sbjct: 45 CPTSTTLVRQLYLPQIPQSASFAAAPTS---FSGASSSSSNHHHPVYHSQNSLP 95
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/58 (22%), Positives = 22/58 (37%)
Frame = -2
Query: 257 WATWLSCDAGKELL*YCGLLCVLTLLGACDISGTCWGYAKRVESCGTGDKDNEHPTCC 84
W+ W S DA + CG+ + + + D + C G + C +CC
Sbjct: 813 WSEWSSGDACNDTCGNCGVTTLSRVCLSQDYNCACSGSTTKQSECAPAPCPFPRTSCC 870
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,667,540
Number of Sequences: 27780
Number of extensions: 294817
Number of successful extensions: 891
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -