Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_C04
         (549 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.7  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   2.7  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              22   3.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.7  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 13/46 (28%), Positives = 16/46 (34%)
 Frame = -2

Query: 206 GLLCVLTLLGACDISGTCWGYAKRVESCGTGDKDNEHPTCCVVTHP 69
           G+  V  L G         G  +  E     D   EHPTC +   P
Sbjct: 145 GIAVVWLLAGLISFVPISLGLHRANEPVVLDDSKEEHPTCALDLTP 190


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 203 LLCVLTLLGACDISGTCWGYAKRVESCGT 117
           LL ++  LG   +SG   G   RV  CG+
Sbjct: 402 LLALVITLGIAIVSGLITGLIMRVLICGS 430


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 197 CVLTLLGACDISGTCWGYAKRVESCGTGDKD 105
           C +     C I G C   A  V+ C  G K+
Sbjct: 67  CPVLRAYTCPICGACGDIAHTVKYCPKGTKN 97


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 468 GKLNIDGTQNLDRHPWWRCI 527
           GK+ +D + N  R  +W  I
Sbjct: 531 GKIQMDSSTNFGREDFWNSI 550


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 468 GKLNIDGTQNLDRHPWWRCI 527
           GK+ +D + N  R  +W  I
Sbjct: 531 GKIQMDSSTNFGREDFWNSI 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,212
Number of Sequences: 438
Number of extensions: 3631
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)