Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_C03
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 284 2e-76
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 284 2e-76
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 284 2e-76
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 282 5e-76
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 281 2e-75
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 277 2e-74
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 149 9e-36
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 140 3e-33
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 133 5e-31
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 53 6e-07
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 47 4e-05
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 47 4e-05
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 47 4e-05
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 47 4e-05
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 47 4e-05
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 46 7e-05
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 34 0.41
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 34 0.41
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 34 0.41
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 2.2
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 2.2
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 2.2
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 2.2
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 2.2
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 2.2
AF088439-1|AAD29537.1| 42|Homo sapiens T-cell receptor beta ch... 31 3.8
AF051099-1|AAD15786.1| 217|Homo sapiens immunoglobulin G kappa ... 31 3.8
EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia compleme... 29 8.9
EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia compleme... 29 8.9
AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens ... 29 8.9
AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens ... 29 8.9
AF088442-1|AAD29539.1| 43|Homo sapiens T-cell receptor beta ch... 29 8.9
AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein. 29 8.9
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/189 (70%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 282 bits (692), Expect = 5e-76
Identities = 132/189 (69%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG++ +LA+
Sbjct: 243 NGYERVLAL 251
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 281 bits (688), Expect = 2e-75
Identities = 132/189 (69%), Positives = 157/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 277 bits (679), Expect = 2e-74
Identities = 131/189 (69%), Positives = 155/189 (82%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FS+GLV++QV+D+G+I+ P +LD E L +FL GV NVA++ L GYPTVAS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSII 242
Query: 550 NGFKNLLAI 576
NG+K +LA+
Sbjct: 243 NGYKRVLAL 251
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 149 bits (360), Expect = 9e-36
Identities = 70/93 (75%), Positives = 78/93 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 288
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 53.6 bits (123), Expect = 5e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 469 LAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAI 576
+ GV NVA++ L IGYPTVAS PHSI NG+K +LA+
Sbjct: 154 ILGVRNVASVCLQIGYPTVASVPHSIINGYKRVLAL 189
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 140 bits (339), Expect = 3e-33
Identities = 68/93 (73%), Positives = 77/93 (82%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KAI+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V
Sbjct: 63 KAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVT 121
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 288
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 122 VPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 53.6 bits (123), Expect = 5e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 469 LAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAI 576
+ GV NVA++ L IGYPTVAS PHSI NG+K +LA+
Sbjct: 153 ILGVRNVASVCLQIGYPTVASVPHSIINGYKRVLAL 188
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 133 bits (321), Expect = 5e-31
Identities = 61/90 (67%), Positives = 75/90 (83%)
Frame = +1
Query: 307 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVAN 486
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 487 VAALSLSIGYPTVASAPHSIANGFKNLLAI 576
VA++ L IGYPTVAS PHSI NG+K +LA+
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLAL 91
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 53.2 bits (122), Expect = 6e-07
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +1
Query: 475 GVANVAALSLSIGYPTVASAPHSIANGFKNLLAI 576
GV NVA++ L IGYPTVAS PHSI NG+K +LA+
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLAL 34
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 47.2 bits (107), Expect = 4e-05
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +1
Query: 1 ARGKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 180
A G++ D + N L ++ ++G VG +FT +V + + AR G A
Sbjct: 76 ALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAF 133
Query: 181 SVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 357
+V + P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 134 TVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLF 193
Query: 358 NISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLRE 462
+ + +K ++DS + + D PE E
Sbjct: 194 GYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASE 228
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 47.2 bits (107), Expect = 4e-05
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +1
Query: 1 ARGKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 180
A G++ D + N L ++ ++G VG +FT +V + + AR G A
Sbjct: 76 ALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAF 133
Query: 181 SVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 357
+V + P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 134 TVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLF 193
Query: 358 NISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLRE 462
+ + +K ++DS + + D PE E
Sbjct: 194 GYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASE 228
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 47.2 bits (107), Expect = 4e-05
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +1
Query: 1 ARGKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 180
A G++ D + N L ++ ++G VG +FT +V + + AR G A
Sbjct: 76 ALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAF 133
Query: 181 SVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 357
+V + P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 134 TVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLF 193
Query: 358 NISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLRE 462
+ + +K ++DS + + D PE E
Sbjct: 194 GYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASE 228
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 47.2 bits (107), Expect = 4e-05
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +1
Query: 1 ARGKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 180
A G++ D + N L ++ ++G VG +FT +V + + AR G A
Sbjct: 76 ALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAF 133
Query: 181 SVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 357
+V + P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 134 TVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLF 193
Query: 358 NISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLRE 462
+ + +K ++DS + + D PE E
Sbjct: 194 GYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASE 228
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 47.2 bits (107), Expect = 4e-05
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +1
Query: 1 ARGKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 180
A G++ D + N L ++ ++G VG +FT +V + + AR G A
Sbjct: 76 ALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAF 133
Query: 181 SVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 357
+V + P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 134 TVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLF 193
Query: 358 NISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLRE 462
+ + +K ++DS + + D PE E
Sbjct: 194 GYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASE 228
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 46.4 bits (105), Expect = 7e-05
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Frame = +1
Query: 1 ARGKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 180
A G++ D + N L ++ ++G VG +FT +V + + AR G A
Sbjct: 76 ALGRSPSDEYKDN--LHQVSKTLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAF 133
Query: 181 SVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 357
+V + P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 134 TVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLF 193
Query: 358 NISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLRE 462
+ + +K ++DS + + D PE E
Sbjct: 194 GYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASE 228
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 33.9 bits (74), Expect = 0.41
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 325 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 504
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 505 S 507
S
Sbjct: 284 S 284
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 33.9 bits (74), Expect = 0.41
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 325 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 504
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 505 S 507
S
Sbjct: 284 S 284
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 33.9 bits (74), Expect = 0.41
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 325 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 504
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 140
Query: 505 S 507
S
Sbjct: 141 S 141
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 416 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 288
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 416 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 288
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 273 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 416 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 288
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 416 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 288
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 416 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 288
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 416 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 288
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AF088439-1|AAD29537.1| 42|Homo sapiens T-cell receptor beta chain
protein.
Length = 42
Score = 30.7 bits (66), Expect = 3.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 387 CQTGVRLRYHLRAGNSRHQAGGPSREVP 470
CQ RLR LRAG+ H GP + VP
Sbjct: 14 CQHSSRLRAVLRAGHQAHGHRGPEKRVP 41
>AF051099-1|AAD15786.1| 217|Homo sapiens immunoglobulin G kappa
chain protein.
Length = 217
Score = 30.7 bits (66), Expect = 3.8
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 364 SPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHS 543
SP+S+G K T+ AP++ P D E+ +G A+V L L+ YP A
Sbjct: 96 SPWSFGQGTKVEIKRTTVAAPSVFIFPPSD--EQLKSGTASVVCL-LNNFYPREAKVQWK 152
Query: 544 IANGFKN 564
+ N ++
Sbjct: 153 VDNALQS 159
>EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia
complementation group I protein.
Length = 1328
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 11 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 130
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674
>EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia
complementation group I isoform 3 protein.
Length = 1328
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 11 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 130
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674
>AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens
cDNA FLJ14658 fis, clone NT2RP2002549. ).
Length = 906
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 11 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 130
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 274 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 312
>AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens
cDNA FLJ10719 fis, clone NT2RP3001109. ).
Length = 1084
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 11 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 130
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 457 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 495
>AF088442-1|AAD29539.1| 43|Homo sapiens T-cell receptor beta chain
protein.
Length = 43
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 375 VWSCCQTGVRLRYHLRAGNSRHQAGGPSREVP 470
V+ C Q G R LRA ++ H+A GP + VP
Sbjct: 11 VFLCQQQGKGARAVLRARDTAHRARGPEKRVP 42
>AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein.
Length = 802
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 11 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 130
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 110 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.137 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,842,111
Number of Sequences: 237096
Number of extensions: 2030194
Number of successful extensions: 5279
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 5062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5278
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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