Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_C03
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 272 9e-74
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 30 1.4
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 29 3.1
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 29 3.1
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 5.5
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 5.5
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 27 7.2
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 27 7.2
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 27 9.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 272 bits (668), Expect = 9e-74
Identities = 122/189 (64%), Positives = 158/189 (83%)
Frame = +1
Query: 10 KAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVV 189
KA++ HL NP+LEKLLPHI NVGFVFT+ DL ++R KLLEN+ APA+ GAIAP V
Sbjct: 63 KALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVK 122
Query: 190 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 369
+P NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++P
Sbjct: 123 LPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTP 182
Query: 370 FSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIA 549
FSYGLVV+QVYD GT++ P +LD+ E+LR++FL+GV NVA++SL++ YPT+AS HS+A
Sbjct: 183 FSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLA 242
Query: 550 NGFKNLLAI 576
NG +N+L +
Sbjct: 243 NGLQNMLGV 251
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = +1
Query: 46 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPE 222
L K +KG G +FT +V + E + AR G +A +VV+P +
Sbjct: 90 LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFS 149
Query: 223 KTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVK 393
+ L +PTK+ KG I + + K G+ + +A +L + + L+ K
Sbjct: 150 MEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 369 GRDVQHVEKSSFRSSHLITRLQDM-DIIDNFNSTL*NLSGDGKSLEERSLLRTKA 208
G + + E F + ++TRL ++ DII N+TL ++G + L +R R +A
Sbjct: 425 GNQIVNYETFFFPAHSIMTRLSNVKDIIKELNTTLNFMTGSNEQLRDRFHNRNRA 479
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 420 EDGTGVVHLFDNKTIRKGRDVQ-HVEKSSFRSSHLITRLQDM 298
ED GVV +F+N+ GR V+ + + + SHL R++++
Sbjct: 791 EDQKGVVQIFNNQCTSSGRKVKLNQNVADYCGSHLEARVEEI 832
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 420 EDGTGVVHLFDNKTIRKGRDVQ-HVEKSSFRSSHLITRLQDM 298
ED GVV +F+N+ GR V+ + + + SHL R++++
Sbjct: 804 EDQKGVVQIFNNQCTSSGRKVKLNQNVADYCGSHLEARVEEI 845
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 325 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 504
G S+ +L L+ +G V ++ D G++ A + + + R LAG A SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629
Query: 505 S 507
+
Sbjct: 630 A 630
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 325 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 504
G S+ +L L+ +G V ++ D G++ A + + + R LAG A SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629
Query: 505 S 507
+
Sbjct: 630 A 630
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 325 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 504
G S+ +L L+ +G V ++ D G++ A + + + R LAG A SL
Sbjct: 504 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 563
Query: 505 S 507
+
Sbjct: 564 A 564
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 127 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 276
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 188 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPT 78
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 506 DNESAATLATPARNFSRRSSGLMSRIAGAKMVPES 402
D + L PA + R+ S +MSR AG+K P S
Sbjct: 72 DASKRSGLKAPAASAIRKDSSVMSRSAGSKASPGS 106
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 297 DIIDNFNSTL*NLSGDGKSLEERSLLRTKA-SVMSGNDDRQWSN 169
D + F+ ++ +L G+G L ERSL TKA +M +W N
Sbjct: 457 DTVSLFSPSILSLHGEGTDL-ERSLSLTKALRLMEDTGQEEWMN 499
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 244 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF- 420
LSI +S G I IL+ GD+ A E L+ + P L + + SG +
Sbjct: 17 LSIGLSLSTGVYHAIKSRIILRRGDRT-AKEEYLMGGRQLPPLPVALSLLTTFLSGILML 75
Query: 421 -APAILDIKPEDLREKFLAGVAN 486
PA + + + F+ GVA+
Sbjct: 76 GVPAEMFQRGAQIWLNFVIGVAS 98
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 332 EAPTLSPGFRIWTSLIISIVPFEILVG 252
EAP L P +W +I+SI P VG
Sbjct: 56 EAPGLKPMGTVWKEVIVSITPGMAAVG 82
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 238 GRKKSSQDQGQCYERE*RQTMEQWLQDE 155
GRKK ++ QC +RE R EQ DE
Sbjct: 424 GRKKREAERDQCLKREKRYADEQCDNDE 451
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.137 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,672,870
Number of Sequences: 27780
Number of extensions: 290564
Number of successful extensions: 940
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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