Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_C03
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.41 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.41 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.71 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.8  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.7  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 313 GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAP 426
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 313 GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAP 426
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +3

Query: 18  QGPS*NKSSSRKTASSHQGKC---WLCLHPWR 104
           QGP  + + +  + S H   C   W+C H WR
Sbjct: 354 QGPPNDGNGNILSPSIHDNICSNGWICEHRWR 385


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 237  EERSLLRTKASVMSGNDDRQW 175
            E R  LRT A++++ N+ R W
Sbjct: 1177 ELRPYLRTAAAILTWNEKRFW 1197


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 231 FLPGSFHPH 257
           FLP S+HPH
Sbjct: 311 FLPPSYHPH 319


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 412 YRSRTPV*QQDHTKRERC 359
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 412 YRSRTPV*QQDHTKRERC 359
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 412 YRSRTPV*QQDHTKRERC 359
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 412 YRSRTPV*QQDHTKRERC 359
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 412 YRSRTPV*QQDHTKRERC 359
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 412 YRSRTPV*QQDHTKRERC 359
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 412 YRSRTPV*QQDHTKRERC 359
           YR  +    +D T+RERC
Sbjct: 59  YRETSKERSRDRTERERC 76


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 239 WKKEVFSGPRPVL*AGMTTD 180
           WK     GP+PV   G T D
Sbjct: 29  WKSRGVVGPKPVPFFGTTKD 48


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 277 IEIINDVHILKPGDKVGASEATLLN 351
           I I+N  HIL+   K G S   L+N
Sbjct: 480 IGIVNQFHILQFITKNGTSNNYLIN 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.137    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,526
Number of Sequences: 438
Number of extensions: 3702
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)