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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_C02
         (416 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998    190   3e-49
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379    189   7e-49
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467          189   9e-49
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611...   184   2e-47
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...   184   3e-47
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349    182   1e-46
03_01_0034 + 318432-318825,318902-319851                              181   2e-46
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505...   176   7e-45
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918...    94   4e-20
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788...    91   3e-19
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257...    87   5e-18
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    87   7e-18
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324...    69   1e-12
09_04_0325 + 16689613-16689772,16690043-16690329                       30   0.65 
05_03_0624 - 16319364-16320581                                         28   2.6  
05_03_0599 + 16026042-16027259                                         28   2.6  
03_01_0524 + 3943581-3943610,3943889-3944050,3944403-3944637,394...    28   3.5  
01_05_0230 + 19543410-19543722,19544165-19544238                       28   3.5  
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28...    27   4.6  
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644...    27   6.0  
06_01_0158 - 1186903-1187013,1187108-1187197,1187504-1187590,118...    27   6.0  
04_04_1351 - 32827136-32827984                                         27   6.0  
04_04_0999 - 30002433-30003279,30003384-30003513,30003620-30003758     27   8.0  
04_04_0950 + 29609484-29611025                                         27   8.0  
04_01_0036 + 436592-437572                                             27   8.0  

>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
          Length = 444

 Score =  190 bits (464), Expect = 3e-49
 Identities = 88/118 (74%), Positives = 97/118 (82%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKYV 241
           MREI+HIQ GQ   ++              + +G Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60

Query: 242 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           PRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLD
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118


>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
          Length = 446

 Score =  189 bits (461), Expect = 7e-49
 Identities = 87/118 (73%), Positives = 97/118 (82%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKYV 241
           MREI+HIQ GQ   ++              + +G Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 242 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLD
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118


>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
          Length = 447

 Score =  189 bits (460), Expect = 9e-49
 Identities = 87/118 (73%), Positives = 97/118 (82%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKYV 241
           MREI+HIQ GQ   ++              + +G Y GDSDLQLERINVYYNEASGG++V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60

Query: 242 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           PRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLD
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118


>05_04_0306 +
           20058640-20059159,20060406-20060819,20060921-20061190,
           20062179-20062849
          Length = 624

 Score =  184 bits (449), Expect = 2e-47
 Identities = 84/119 (70%), Positives = 97/119 (81%)
 Frame = +2

Query: 59  KMREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKY 238
           KMREI+HIQ GQ   ++              +P+G Y G SDLQLER+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239

Query: 239 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           VPRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLD
Sbjct: 240 VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 298


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score =  184 bits (447), Expect = 3e-47
 Identities = 83/118 (70%), Positives = 97/118 (82%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKYV 241
           MREI+HIQ GQ   ++              +P+G Y G+SDLQLER+NVYYNEAS G++V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 242 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           PRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLD
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118


>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
          Length = 447

 Score =  182 bits (443), Expect = 1e-46
 Identities = 83/118 (70%), Positives = 96/118 (81%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKYV 241
           MREI+HIQ GQ   ++              +P+G Y G SDLQLER+NVYYNEAS G++V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 242 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           PRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLD
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118


>03_01_0034 + 318432-318825,318902-319851
          Length = 447

 Score =  181 bits (441), Expect = 2e-46
 Identities = 82/118 (69%), Positives = 95/118 (80%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKYV 241
           MREI+HIQ GQ   ++              + +G Y GDSDLQLER+NVYYNEAS G++V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60

Query: 242 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           PRA+L+DLEPGTMDSVRSGP+G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLD
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118


>03_05_0575 +
           25747813-25748206,25748567-25748614,25750296-25750565,
           25750658-25751334
          Length = 462

 Score =  176 bits (428), Expect = 7e-45
 Identities = 81/118 (68%), Positives = 93/118 (78%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKYV 241
           MREI+HIQ GQ   ++              +P+G Y G S  QLERINVY+NEASGG++V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60

Query: 242 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           PRA+L+DLEPGTMDS+RSGP G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLD
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118


>07_03_0994 +
           23190344-23190456,23191367-23191581,23191663-23191862,
           23192420-23192928,23193048-23193363
          Length = 450

 Score = 94.3 bits (224), Expect = 4e-20
 Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQL--ERINVYYNEASGGK 235
           MREI+ I  GQ   ++               P G    D+ + +  +  N +++E   GK
Sbjct: 1   MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60

Query: 236 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           +VPRAI VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 61  HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120


>11_02_0058 +
           7879859-7879951,7880844-7881078,7881165-7881535,
           7881648-7882304
          Length = 451

 Score = 91.1 bits (216), Expect = 3e-19
 Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQL--ERINVYYNEASGGK 235
           MRE + I  GQ   ++               P G   GD  +    +  N +++E   GK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 236 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120


>03_05_0974 +
           29324025-29324117,29325064-29325298,29325385-29325755,
           29325864-29326520
          Length = 451

 Score = 87.0 bits (206), Expect = 5e-18
 Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
 Frame = +2

Query: 62  MREIVHIQAGQWXTRL-----ELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEAS 226
           MRE + I  GQ   ++     EL             PS    G  D   +  N +++E  
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGD---DAFNTFFSETG 57

Query: 227 GGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 406
            GK+VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD 
Sbjct: 58  AGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDL 117

Query: 407 VLD 415
            LD
Sbjct: 118 CLD 120


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 86.6 bits (205), Expect = 7e-18
 Identities = 35/74 (47%), Positives = 52/74 (70%)
 Frame = +2

Query: 194 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 373
           +  N +++E S GK+VPRA+ VDLEP  +D V++GP+ Q+F P+  +  +  A NN+A+G
Sbjct: 107 DAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARG 166

Query: 374 HYTEGAELVDSVLD 415
           HYT G E+VD  LD
Sbjct: 167 HYTVGREVVDLCLD 180


>05_01_0412 -
           3248405-3248458,3248533-3248637,3248950-3249078,
           3249279-3249353,3249520-3249624,3249714-3249767,
           3249970-3250370,3250583-3250694,3250886-3251086,
           3251844-3251972
          Length = 454

 Score = 69.3 bits (162), Expect = 1e-12
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
 Frame = +2

Query: 65  REIVHIQAGQWXTRLELXXXXXXXXXXXXNPSGAYHGDSDLQLERINVYYNEASGGKYVP 244
           REI+ IQ GQ   ++ +               G     +    +R +V++ +A    Y+P
Sbjct: 3   REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62

Query: 245 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 415
           RA+LVDLEP  ++ +++  +  ++  +N    +   GAGNNWA G Y +G ++VD ++D
Sbjct: 63  RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMD 120


>09_04_0325 + 16689613-16689772,16690043-16690329
          Length = 148

 Score = 30.3 bits (65), Expect = 0.65
 Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +2

Query: 314 FRPDNFVFGQSGAGN-NWA 367
           F PDNFVF QS AG  NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147


>05_03_0624 - 16319364-16320581
          Length = 405

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +2

Query: 194 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 370
           ER+ V  +   G  ++P +IL  L P    S    P    FRP   +   +     W K
Sbjct: 185 ERLRVADDGGGGSAFLPPSILPSLLPAPRCSTPLSPSSPPFRPSRVIVRWARPPPGWCK 243


>05_03_0599 + 16026042-16027259
          Length = 405

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +2

Query: 194 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 370
           ER+ V  +   G  ++P +IL  L P    S    P    FRP   +   +     W K
Sbjct: 185 ERLRVADDGGGGSAFLPPSILPSLLPAPRCSTPLSPSSPPFRPSRVIVRWARPPPGWCK 243


>03_01_0524 +
           3943581-3943610,3943889-3944050,3944403-3944637,
           3945626-3945666,3946101-3946145,3947119-3947246,
           3947446-3947554,3947641-3947694
          Length = 267

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 290 RSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           ++ P+  +   +++ +G SGAGN ++ GH
Sbjct: 64  QANPYWAMMHTNSYKYGYSGAGNYYSYGH 92


>01_05_0230 + 19543410-19543722,19544165-19544238
          Length = 128

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 372 PLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSRSTRMARGTYLPPEASL 214
           P     P P  P T LS  +   +G  R  +   GSR  R+  G +  P A +
Sbjct: 63  PAPPSTPPPASPPTPLSSTESGRRGEGRGSNAAGGSRRRRVRGGPHKVPPAKI 115


>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
            282768-282923,283224-283349,283426-283560,283815-283942,
            284037-284148,284233-284547,284655-284771,284871-285166,
            285252-285783,287980-288082,288808-288881,288965-289062,
            289340-289380,289977-290032,290170-290244,290377-290469,
            290602-290850,290930-291002,291681-291766,291853-291938,
            292067-292142,292280-292347,292430-292496,292570-292665,
            292741-292843,293214-293309,293396-293466
          Length = 2047

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = -3

Query: 402  STSSAPSV*C-PLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSR--STRMAR 244
            STS+AP+    P AQ  PA    K     R   PK P+  E+  PG R  S+ +AR
Sbjct: 1712 STSAAPAAPSEPKAQPEPAEPKVKETEPSRTPEPKAPKTEEASQPGGRIFSSPLAR 1767


>10_08_0731 +
           20161962-20163628,20163721-20163862,20164181-20164490,
           20164566-20166466,20166557-20166650,20166953-20167440,
           20167919-20168599,20168870-20168944,20170148-20170210,
           20170588-20170633,20171373-20171420,20171484-20171557
          Length = 1862

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 343 LSENEVVGAEDLSEGSRADR--VHGAGLEVDEDGAGHVLASGGL 218
           + E +V G  ++ +G   D+  + G  +EVDE   G +  SGGL
Sbjct: 96  VEEEDVQGGVNVGDGVAEDKSNLEGVKVEVDEVIGGELKDSGGL 139


>06_01_0158 -
           1186903-1187013,1187108-1187197,1187504-1187590,
           1187668-1187839,1187917-1188647,1188789-1188861,
           1189295-1189380,1189455-1189529,1189610-1189643,
           1190331-1190622,1191073-1191439
          Length = 705

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 215 NEASGGKYVPRAILVDLEPGTMDSVRSGPFG 307
           + + GG   PR  L D  PG    +RS P G
Sbjct: 74  DRSPGGSSQPRRSLADRSPGNRSELRSTPAG 104


>04_04_1351 - 32827136-32827984
          Length = 282

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -3

Query: 354 PAPDCPKTKLSGRKICPKGPERTESM-VPGSRST 256
           P+P  PK +  GRK CP  P  T S   P S  T
Sbjct: 170 PSPSPPK-RHGGRKACPPSPTPTPSTPTPSSSDT 202


>04_04_0999 - 30002433-30003279,30003384-30003513,30003620-30003758
          Length = 371

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 240 TYLPP-EASL**TLMRSSCKSESPW*APLGLDPVLIGDDLPEL 115
           TY P   AS   +   S C S SP  A  G+DP+L   DLPE+
Sbjct: 203 TYCPAVSASASASAPTSPCSSTSPSCARAGVDPLL---DLPEI 242


>04_04_0950 + 29609484-29611025
          Length = 513

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 379 VVSLSPVVTGAGLSENEVVGAEDLSEGSRADRVHGAGLEVDED 251
           +VSL+   +G+G +E  V G   LS G+ A    G G   D D
Sbjct: 16  IVSLAAADSGSGEAETTVPGQIRLSCGASASATDGDGRAWDGD 58


>04_01_0036 + 436592-437572
          Length = 326

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = -2

Query: 361 VVTGAGLSENEVVGAEDLSEGSRADRVHGAGLEVDED 251
           V  GA + E E+V A  L+EG    RV GAGLEV +D
Sbjct: 240 VARGANVDEAELVRA--LAEG----RVAGAGLEVFDD 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,046,376
Number of Sequences: 37544
Number of extensions: 225244
Number of successful extensions: 769
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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