Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_B21
(485 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 30 0.77
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 1.8
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 1.8
AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein. 29 1.8
AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical ... 29 1.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 2.4
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 4.1
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 4.1
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 27 5.5
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 27 5.5
U80455-5|AAB37883.1| 216|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z73972-9|CAB60280.2| 353|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z71177-10|CAB60279.2| 353|Caenorhabditis elegans Hypothetical p... 27 7.2
U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical pr... 27 7.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 7.2
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 27 9.5
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 30.7 bits (66), Expect = 0.59
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 380 QGEQLVSGDGCGASLQHGLGADRGEVGSGAVPEGQRSGVILSAEQ 246
QG+Q G G G + Q+G A R SG +G +SG ++++Q
Sbjct: 147 QGQQSGFGGGFGGNSQNGFPAQRPSQQSGFGGQGMQSGFGMNSQQ 191
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 30.3 bits (65), Expect = 0.77
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 283 SGTAPEPT-SPRSAPRPC*RLAPQPSPETSCSPWKTVFLKLP 405
+G +P+P +PR +P P P P P +S SP T + P
Sbjct: 156 AGQSPDPKRAPRYSPPPSSTPTPTPPPSSSSSPTPTPLRRSP 197
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 286 GTAPE-PTSPRSAPRPC*RLAPQPSPETSCSP 378
G AP P P SAP P AP P P + +P
Sbjct: 99 GAAPAAPAEPASAPAPAPEAAPAPEPTPAPAP 130
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 271 ERWPSGTAPEPTSPRSAPRPC*RLAPQPSPETSCSP 378
E + AP +P AP P AP P+PE + P
Sbjct: 178 EEGAAPAAPAEPAPVPAPEPAPEAAPAPAPEAAPVP 213
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 223 KMRARQHACSALSITPERWPSGTAPEPTSPRSAPRPC 333
K + +HA L ++ S APE SP S P C
Sbjct: 433 KAKLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDC 469
>AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein.
Length = 167
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 217 SSKMRARQHACSALSITPERWPSGTAPEPTSPRSAPRPC*RLA-PQPSPETSCSPWKTV 390
S+K R++ ++TP++ S P+P P S+P+P A P S S P TV
Sbjct: 64 STKSRSKSLKSKQSAVTPKKRASPIPPQPAPP-SSPKPTEESATPSSSFAPSTEPTPTV 121
>AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical
protein T06A4.2 protein.
Length = 167
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 217 SSKMRARQHACSALSITPERWPSGTAPEPTSPRSAPRPC*RLA-PQPSPETSCSPWKTV 390
S+K R++ ++TP++ S P+P P S+P+P A P S S P TV
Sbjct: 64 STKSRSKSLKSKQSAVTPKKRASPIPPQPAPP-SSPKPTEESATPSSSFAPSTEPTPTV 121
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 268 PERWPSGTAPEPTSPRSAPRPC*RLAPQPSPETSCSP 378
PE P+ T P+P P P+P + P+ + P
Sbjct: 15 PESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPP 51
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 280 PSGTAPEPTSPRSAPRPC*RLAPQPSPETSCSP 378
P G P P P + P P P+P PE P
Sbjct: 92 PQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEP 124
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 268 PERWPSGTAPEPTSPRSAPRPC*RLAPQPSPETSCSP 378
P+ + P PT P P P P+P PE P
Sbjct: 92 PQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEP 128
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 232 ARQHACSALSITPERWPSGTAPEPTSPRSAPRPC*RLAPQ-PSPETSCSPWKTVFLKLP 405
A Q + A I P + + T P+ + S P+P APQ PSP +P + + P
Sbjct: 10 APQFSTYATVIDPPKHVTATHPDELTTASHPQPTHPSAPQDPSPAVPSTPVRVPYPTAP 68
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 280 PSGTAPEPTSPRSAPRPC*RLAPQPSPETSCSP 378
P+ APEP +P AP P LAP+ +P + +P
Sbjct: 180 PAEPAPEP-APAPAPAPEAALAPETAPAPAPAP 211
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.9 bits (59), Expect = 4.1
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 263 SRRSAGPPGQHRSLPRPDRLQGRAEDSLHSRHQR---RAVLPGRQSSSSCLRRWFEREIR 433
SR + P + R+ R +EDS +R +R + +L +Q+ + L+RW RE +
Sbjct: 278 SRSRSRTPQRSRTSKRRRSNSHASEDSDDAREKRAFKQMMLDKKQAYLARLKRWESRERQ 337
Query: 434 LSKTRC*RDRKPGRD 478
+SK R R+ + +D
Sbjct: 338 MSK-RYEREERKEKD 351
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.9 bits (59), Expect = 4.1
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 263 SRRSAGPPGQHRSLPRPDRLQGRAEDSLHSRHQR---RAVLPGRQSSSSCLRRWFEREIR 433
SR + P + R+ R +EDS +R +R + +L +Q+ + L+RW RE +
Sbjct: 278 SRSRSRTPQRSRTSKRRRSNSHASEDSDDAREKRAFKQMMLDKKQAYLARLKRWESRERQ 337
Query: 434 LSKTRC*RDRKPGRD 478
+SK R R+ + +D
Sbjct: 338 MSK-RYEREERKEKD 351
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 27.9 bits (59), Expect = 4.1
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 263 SRRSAGPPGQHRSLPRPDRLQGRAEDSLHSRHQR---RAVLPGRQSSSSCLRRWFEREIR 433
SR + P + R+ R +EDS +R +R + +L +Q+ + L+RW RE +
Sbjct: 120 SRSRSRTPQRSRTSKRRRSNSHASEDSDDAREKRAFKQMMLDKKQAYLARLKRWESRERQ 179
Query: 434 LSKTRC*RDRKPGRD 478
+SK R R+ + +D
Sbjct: 180 MSK-RYEREERKEKD 193
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 245 PVQR*VSRRSAGPPGQHRSLPRPDRLQGRAEDSLHSRHQRRAVLPGRQSSSSCLRRWFER 424
P +R VSR + PP + + P + R + S RR ++S S +R W +
Sbjct: 134 PPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSRSKSPPRRNYRQRQRSGSPPVRNWRDE 193
Query: 425 E 427
E
Sbjct: 194 E 194
>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical protein
R11A8.6 protein.
Length = 1141
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 137 EERVLAPGHVRVHVDLVQRLRQMGEALATDRTEVHL 30
+E ++ G R + VQRLR+ + ++TD VH+
Sbjct: 970 DESLIEEGLCREVTNRVQRLRKQAKLVSTDTAHVHI 1005
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 262 ITPERWPSGTAP-EPTSPRSAPRPC*RLAPQPSPETSCSPWKTVFLKLP 405
ITP PS P + + P P ++P P P TSC+P K + ++ P
Sbjct: 368 ITPTVPPSMIQTVNPPTVSALPSPS--VSPAPVPTTSCAPQKPLVVQPP 414
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 217 SSKMRARQHACSALSITPERWPSGTAPEPTSPRSAPRPC*RLAPQPSPETSCSP 378
S+ RA+ + A P P+ T P P +P AP A P+P + +P
Sbjct: 218 SASTRAKAASAVAPEANPAPVPTATKPSPFAPAIAPLRDGAPAQPPAPIQASAP 271
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 217 SSKMRARQHACSALSITPERWPSGTAPEPTSPRSAPRPC*RLAPQPSPETSCSP 378
S+ RA+ + A P P+ T P P +P AP A P+P + +P
Sbjct: 218 SASTRAKAASAVAPEANPAPVPTATKPSPFAPAIAPLRDGAPAQPPAPIQASAP 271
>U80455-5|AAB37883.1| 216|Caenorhabditis elegans Hypothetical
protein T01D1.3 protein.
Length = 216
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 171 YALHTCNNKYLSASGKLQDACTATCLFSAEYH 266
+A++ CNN L+A + + AC F ++H
Sbjct: 182 FAMNYCNNPILTAQSQYRTACDKYWRFCGKFH 213
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 283 SGTAPEPTSPRSAPRPC*RLA-PQPSPE 363
S T P PT+P+ AP P R+ P PSP+
Sbjct: 455 SSTTP-PTTPKPAPPPPSRIPNPSPSPQ 481
>Z73972-9|CAB60280.2| 353|Caenorhabditis elegans Hypothetical
protein F15H10.8 protein.
Length = 353
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Frame = -2
Query: 94 ISSNDSDRWAKRLRPI--ERRF 35
I+ ND+DRW K + P+ E+RF
Sbjct: 300 ITKNDADRWFKLINPLVDEKRF 321
>Z71177-10|CAB60279.2| 353|Caenorhabditis elegans Hypothetical
protein F15H10.8 protein.
Length = 353
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Frame = -2
Query: 94 ISSNDSDRWAKRLRPI--ERRF 35
I+ ND+DRW K + P+ E+RF
Sbjct: 300 ITKNDADRWFKLINPLVDEKRF 321
>U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical
protein C25E10.8 protein.
Length = 137
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 286 GTAPEPTSPRSAPRPC*R 339
GTA EPT + PRPC R
Sbjct: 92 GTACEPTCEKPGPRPCTR 109
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 283 SGTAPEPTSPRSAPRPC*RLA-PQPSPE 363
S T P PT+P+ AP P R+ P PSP+
Sbjct: 462 SSTTP-PTTPKPAPPPPSRIPNPSPSPQ 488
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 26.6 bits (56), Expect = 9.5
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 247 CSALSITPERWPSGTAPEPTSPRSAPRPC*RLA-PQPSPETSCSP 378
C A I ER PSG + P P AP P P +P SC P
Sbjct: 116 CPACCIPGERGPSGDSGLPALP-GAPGPDGAPGRPGTTPNASCIP 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,569,669
Number of Sequences: 27780
Number of extensions: 220879
Number of successful extensions: 1052
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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