Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_B21
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.2  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 217 SSKMRARQHACSALSITPERWPSGTAPEPTSPRS 318
           +  +RAR+  C   S+T +R      P  TS +S
Sbjct: 251 AKSIRARRTECVTNSVTCDRPSDEAEPSSTSKKS 284


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -1

Query: 458 HVNTLFY*DVFLVQTSDEGSLRKTVFQGEQLVSGDG 351
           HV+  F     +++  D GS+   + +G+  VS DG
Sbjct: 118 HVSCSFSAGSTIIREGDVGSIVYVMEEGKVEVSRDG 153


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +2

Query: 53  SQALRPSVGVVGRDPRGRERALGRGHALHPRVQS*RGRQVRPAHLQQQVSERQ 211
           S+  R S  V G   +   + L    + HP+ Q+    Q +    QQQ  ++Q
Sbjct: 793 SEDKRLSKSVNGDQSQPPHQQLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQ 845


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,241
Number of Sequences: 438
Number of extensions: 2550
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)