Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_B20
(450 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020961-1|AAH20961.1| 495|Homo sapiens solute carrier family 1... 32 1.0
AL590428-1|CAI15635.1| 495|Homo sapiens solute carrier family 1... 32 1.0
AL121972-1|CAI20417.1| 495|Homo sapiens solute carrier family 1... 32 1.0
AK075320-1|BAC11546.1| 277|Homo sapiens protein ( Homo sapiens ... 32 1.0
AJ387747-1|CAB62540.1| 495|Homo sapiens sialin protein. 32 1.0
AF244577-1|AAF97769.1| 536|Homo sapiens membrane glycoprotein H... 32 1.0
J05556-1|AAA88021.1| 467|Homo sapiens neutrophil collagenase pr... 29 5.5
DQ141306-1|AAZ38714.1| 467|Homo sapiens matrix metalloproteinas... 29 5.5
BC074989-1|AAH74989.1| 467|Homo sapiens matrix metallopeptidase... 29 5.5
BC074988-1|AAH74988.1| 467|Homo sapiens matrix metallopeptidase... 29 5.5
BC119640-1|AAI19641.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 29 9.7
BC119639-1|AAI19640.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 29 9.7
BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane pr... 29 9.7
AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal memb... 29 9.7
AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membr... 29 9.7
AF141315-1|AAD48406.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 29 9.7
>BC020961-1|AAH20961.1| 495|Homo sapiens solute carrier family 17
(anion/sugar transporter), member 5 protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +3
Query: 234 TVPLGGFLTYFLN---VFFFYGALASFGFLL 317
++PL G + Y++N VF+F+G + F FLL
Sbjct: 213 SLPLSGIICYYMNWTYVFYFFGTIGIFWFLL 243
>AL590428-1|CAI15635.1| 495|Homo sapiens solute carrier family 17
(anion/sugar transporter), member 5 protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +3
Query: 234 TVPLGGFLTYFLN---VFFFYGALASFGFLL 317
++PL G + Y++N VF+F+G + F FLL
Sbjct: 213 SLPLSGIICYYMNWTYVFYFFGTIGIFWFLL 243
>AL121972-1|CAI20417.1| 495|Homo sapiens solute carrier family 17
(anion/sugar transporter), member 5 protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +3
Query: 234 TVPLGGFLTYFLN---VFFFYGALASFGFLL 317
++PL G + Y++N VF+F+G + F FLL
Sbjct: 213 SLPLSGIICYYMNWTYVFYFFGTIGIFWFLL 243
>AK075320-1|BAC11546.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ90839 fis, clone Y79AA1002213, highly similar to
Solute carrier family 17 (anion/sugar transporter),
member 5. ).
Length = 277
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +3
Query: 234 TVPLGGFLTYFLN---VFFFYGALASFGFLL 317
++PL G + Y++N VF+F+G + F FLL
Sbjct: 213 SLPLSGIICYYMNWTYVFYFFGTIGIFWFLL 243
>AJ387747-1|CAB62540.1| 495|Homo sapiens sialin protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +3
Query: 234 TVPLGGFLTYFLN---VFFFYGALASFGFLL 317
++PL G + Y++N VF+F+G + F FLL
Sbjct: 213 SLPLSGIICYYMNWTYVFYFFGTIGIFWFLL 243
>AF244577-1|AAF97769.1| 536|Homo sapiens membrane glycoprotein HP59
protein.
Length = 536
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +3
Query: 234 TVPLGGFLTYFLN---VFFFYGALASFGFLL 317
++PL G + Y++N VF+F+G + F FLL
Sbjct: 254 SLPLSGIICYYMNWTYVFYFFGTIGIFWFLL 284
>J05556-1|AAA88021.1| 467|Homo sapiens neutrophil collagenase
protein.
Length = 467
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 302 FRVFVNGTHYYSYWLASARVARVAIGSLW 388
F VF +G YY++ L + RV RVA G+ W
Sbjct: 434 FHVF-SGPRYYAFDLIAQRVTRVARGNKW 461
>DQ141306-1|AAZ38714.1| 467|Homo sapiens matrix metalloproteinase 8
(neutrophil collagenase) protein.
Length = 467
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 302 FRVFVNGTHYYSYWLASARVARVAIGSLW 388
F VF +G YY++ L + RV RVA G+ W
Sbjct: 434 FHVF-SGPRYYAFDLIAQRVTRVARGNKW 461
>BC074989-1|AAH74989.1| 467|Homo sapiens matrix metallopeptidase 8
(neutrophil collagenase) protein.
Length = 467
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 302 FRVFVNGTHYYSYWLASARVARVAIGSLW 388
F VF +G YY++ L + RV RVA G+ W
Sbjct: 434 FHVF-SGPRYYAFDLIAQRVTRVARGNKW 461
>BC074988-1|AAH74988.1| 467|Homo sapiens matrix metallopeptidase 8
(neutrophil collagenase) protein.
Length = 467
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 302 FRVFVNGTHYYSYWLASARVARVAIGSLW 388
F VF +G YY++ L + RV RVA G+ W
Sbjct: 434 FHVF-SGPRYYAFDLIAQRVTRVARGNKW 461
>BC119640-1|AAI19641.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 189 KGITDSRPTPGSHTRTVPLGGFLTYFLNVFFF 284
KG+TDS P P + T P FL+ NVF F
Sbjct: 88 KGLTDSTPMPSN--STYPAFSFLSAIDNVFLF 117
>BC119639-1|AAI19640.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 189 KGITDSRPTPGSHTRTVPLGGFLTYFLNVFFF 284
KG+TDS P P + T P FL+ NVF F
Sbjct: 88 KGLTDSTPMPSN--STYPAFSFLSAIDNVFLF 117
>BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane
protein 2, 22kDa protein.
Length = 195
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 225 HTRTVPLGGFLTYFLNVFFFYGALASFGFLLTAHTTTP 338
++R++ +GG L Y + FFF G L+ F + H P
Sbjct: 63 NSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPP 100
>AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal
membrane protein 2 protein.
Length = 195
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 225 HTRTVPLGGFLTYFLNVFFFYGALASFGFLLTAHTTTP 338
++R++ +GG L Y + FFF G L+ F + H P
Sbjct: 63 NSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPP 100
>AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membrane
protein-like protein.
Length = 195
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 225 HTRTVPLGGFLTYFLNVFFFYGALASFGFLLTAHTTTP 338
++R++ +GG L Y + FFF G L+ F + H P
Sbjct: 63 NSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPP 100
>AF141315-1|AAD48406.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 189 KGITDSRPTPGSHTRTVPLGGFLTYFLNVFFF 284
KG+TDS P P + T P FL+ NVF F
Sbjct: 88 KGLTDSTPMPSN--STYPAFSFLSAIDNVFLF 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,483,754
Number of Sequences: 237096
Number of extensions: 1406890
Number of successful extensions: 2101
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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