Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_B17
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 177 2e-44
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 177 2e-44
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 177 2e-44
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 177 2e-44
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 177 2e-44
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 177 2e-44
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 177 2e-44
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 177 2e-44
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 177 2e-44
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 177 2e-44
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 175 8e-44
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 171 2e-42
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 151 2e-36
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 149 6e-36
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 77 5e-14
AY167994-1|AAO38808.1| 201|Homo sapiens alpha 2,3-sialyltransfe... 34 0.28
AL592548-3|CAI22183.1| 201|Homo sapiens ST3 beta-galactoside al... 34 0.28
AL592548-2|CAI22181.1| 185|Homo sapiens ST3 beta-galactoside al... 34 0.28
AL451062-4|CAH71024.1| 201|Homo sapiens ST3 beta-galactoside al... 34 0.28
AL451062-3|CAH71022.1| 185|Homo sapiens ST3 beta-galactoside al... 34 0.28
AL357079-3|CAI16787.1| 201|Homo sapiens ST3 beta-galactoside al... 34 0.28
AL357079-2|CAI16786.1| 185|Homo sapiens ST3 beta-galactoside al... 34 0.28
AF425863-1|AAO13871.1| 185|Homo sapiens alpha 2,3-sialyltransfe... 34 0.28
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 32 1.1
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 44 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 103
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 104 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 163
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 164 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 198
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 177 bits (431), Expect = 2e-44
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 175 bits (426), Expect = 8e-44
Identities = 78/155 (50%), Positives = 110/155 (70%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKLK+++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +
Sbjct: 46 NFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVF 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 171 bits (415), Expect = 2e-42
Identities = 76/155 (49%), Positives = 109/155 (70%)
Frame = -2
Query: 541 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 362
NF+RNKL +++FLRKR N +P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+
Sbjct: 46 NFYRNKLNYLAFLRKRMNTSPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVS 105
Query: 361 DGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAI 182
DG PPP+D V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA
Sbjct: 106 DGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAK 165
Query: 181 KLISYERKLKKITKEAGEKVAKATAPFTTVVQSYG 77
+++L ++ K+A + V K +T V++++G
Sbjct: 166 IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 151 bits (365), Expect = 2e-36
Identities = 68/138 (49%), Positives = 95/138 (68%)
Frame = -2
Query: 490 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 311
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 310 XXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAG 131
V LKP RK+ ++GRL+HEVGWKY+ V LEDKRK KA +++L ++ K+A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 130 EKVAKATAPFTTVVQSYG 77
+ V K +T V++++G
Sbjct: 122 KNVEKKIDKYTEVLKTHG 139
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 149 bits (361), Expect = 6e-36
Identities = 67/138 (48%), Positives = 95/138 (68%)
Frame = -2
Query: 490 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 311
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 310 XXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAG 131
V LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 130 EKVAKATAPFTTVVQSYG 77
+ V K +T V++++G
Sbjct: 122 KNVEKKIDKYTEVLKTHG 139
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 76.6 bits (180), Expect = 5e-14
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = -2
Query: 418 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVG 239
M+ HKT+RG +L L+ +DG PPP+D V LKP RK+ +GR + EV
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 238 WKYRDVVRKLEDKRKVKAIKLISYERK-LKKITKEAGEKVAK 116
WKY+ V LE+KRK KA K+ +++K L ++ K+A + V K
Sbjct: 61 WKYQAVTATLEEKRKEKA-KIHYWKKKQLMRLRKQAEKNVKK 101
>AY167994-1|AAO38808.1| 201|Homo sapiens alpha
2,3-sialyltransferase III type D5 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 231 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 398
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL592548-3|CAI22183.1| 201|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 231 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 398
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL592548-2|CAI22181.1| 185|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 185
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 231 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 398
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL451062-4|CAH71024.1| 201|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 231 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 398
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL451062-3|CAH71022.1| 185|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 185
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 231 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 398
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL357079-3|CAI16787.1| 201|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 231 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 398
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL357079-2|CAI16786.1| 185|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 185
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 231 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 398
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AF425863-1|AAO13871.1| 185|Homo sapiens alpha
2,3-sialyltransferase III type D2+26 protein.
Length = 185
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 231 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 398
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -2
Query: 274 YCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKV 122
Y R S E+ K RDV+ LEDK KV ++ + E++ KK+ E +V
Sbjct: 501 YDFQARNSSELSVKQRDVLEVLEDKEKVSELEAV-MEKQKKKVEGEVEMEV 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,775,846
Number of Sequences: 237096
Number of extensions: 1678012
Number of successful extensions: 3606
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3606
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -