Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_B08
(542 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 25 0.66
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.5
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 2.0
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 3.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 3.5
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 22 4.6
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 22 4.6
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 6.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 8.1
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 24.6 bits (51), Expect = 0.66
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +3
Query: 9 LLEEQHHLGPKYEESRLGEWNLLLRTNKTKVSLRNLLKPGR 131
L +++H + P +S +G W + + K+ L+ +PG+
Sbjct: 135 LRKKKHKVNPLLMQSGMGSWEVYTKGIGAKLLLQMGFEPGK 175
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 417 KDQTSIEIKDLQPNSMYFLQVQT 485
K Q + +LQP+S+Y L+V+T
Sbjct: 1552 KMQRRFVVTNLQPSSVYQLKVET 1574
Score = 22.2 bits (45), Expect = 3.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 396 VNH--QTVPKDQTSIEIKDLQPNSMYFLQVQTISQFGVGKLRSEKASI 533
+NH +T+P T E DLQ + Y V ++ G G+ A +
Sbjct: 1260 LNHGKRTLPAKNTYFEATDLQQHVEYQFWVTGSTRVGEGQSSKVAAQV 1307
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 417 KDQTSIEIKDLQPNSMYFLQVQT 485
K Q + +LQP+S+Y L+V+T
Sbjct: 1548 KMQRRFVVTNLQPSSVYQLKVET 1570
Score = 22.2 bits (45), Expect = 3.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 396 VNH--QTVPKDQTSIEIKDLQPNSMYFLQVQTISQFGVGKLRSEKASI 533
+NH +T+P T E DLQ + Y V ++ G G+ A +
Sbjct: 1256 LNHGKRTLPAKNTYFEATDLQQHVEYQFWVTGSTRVGEGQSSKVAAQV 1303
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.0 bits (47), Expect = 2.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 165 THLQQLHGNDTNGQVLIGYARRLSFYLFVTVNSILRV*TPHILVLNDV 22
T ++ L+ T VLI RR+ F + S V TP +L+L+ +
Sbjct: 288 TKVRTLNKRATGVNVLINGRRRIIFARREVILSAGSVNTPQLLMLSGI 335
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 144 GNDTNGQVLIGYARRLSFYLFVT 76
GN T Q++ RRL ++LF T
Sbjct: 198 GNFTCIQIVFNLRRRLGYHLFHT 220
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 3.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 144 GNDTNGQVLIGYARRLSFYLFVT 76
GN T +V+ RRL +YLF T
Sbjct: 229 GNFTCLEVVFVLKRRLGYYLFHT 251
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 393 LVNHQTVPKDQTSIEI 440
L NH TVP D+ EI
Sbjct: 94 LYNHSTVPVDEDGEEI 109
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.8 bits (44), Expect = 4.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 410 CLMIDKNRIQLSTQSPY 360
C M++K + LST+ P+
Sbjct: 30 CTMVEKRVLALSTKPPF 46
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 201 TVGLVKKILLYQTHLQQLHGND 136
T+ L+++ILL + Q LH +D
Sbjct: 36 TLNLMEQILLAKIEKQNLHESD 57
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -3
Query: 150 LHGNDTNGQVLIG 112
+H +DT+G+ L+G
Sbjct: 173 IHSSDTDGRALLG 185
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,294
Number of Sequences: 438
Number of extensions: 3167
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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