Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_B05
(447 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 283 4e-77
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 283 4e-77
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 283 4e-77
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 151 2e-37
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 151 2e-37
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 114 2e-26
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 100 4e-22
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 71 3e-13
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 61 4e-10
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 61 4e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 61 4e-10
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 57 7e-09
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 43 9e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 40 8e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 40 0.001
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 40 0.001
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.002
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 34 0.041
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 34 0.041
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.17
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 32 0.22
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 31 0.29
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 31 0.29
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 30 0.88
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 3.6
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 3.6
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 3.6
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 6.2
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 6.2
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 6.2
Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical pr... 27 8.2
U23525-7|AAC46569.1| 557|Caenorhabditis elegans Yeast smf (diva... 27 8.2
U23525-6|AAU05559.1| 471|Caenorhabditis elegans Yeast smf (diva... 27 8.2
U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone... 27 8.2
AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein. 27 8.2
AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein. 27 8.2
AC024800-2|AAF60723.2| 320|Caenorhabditis elegans Serpentine re... 27 8.2
AC024800-1|AAF60725.1| 320|Caenorhabditis elegans Serpentine re... 27 8.2
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 14 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 134 DYNIQKESTLHLVLRLRGGMQIF 156
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 90 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 210 DYNIQKESTLHLVLRLRGGMQIF 232
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 226 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 286 DYNIQKESTLHLVLRLRGGMQIF 308
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 242 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 301
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 302 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 362 DYNIQKESTLHLVLRLRGGMQIF 384
Score = 281 bits (688), Expect = 2e-76
Identities = 139/143 (97%), Positives = 139/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 318 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 377
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTL GKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 378 RGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 438 DYNIQKESTLHLVLRLRGGMQIF 460
Score = 216 bits (528), Expect = 5e-57
Identities = 107/110 (97%), Positives = 107/110 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 453
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAG 347
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAG
Sbjct: 454 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
Score = 159 bits (385), Expect = 1e-39
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 387 IQKESTLHLVLRLRGGMQIF 446
IQKESTLHLVLRLRGGMQIF
Sbjct: 61 IQKESTLHLVLRLRGGMQIF 80
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +2
Query: 167 GIHTSPGLTSARWYADLRQNFNWQNYHTRS*AV*HN 274
G+++S G S R YADLRQ+F+W+N+H+R + H+
Sbjct: 503 GVYSSFGAPSQRRYADLRQDFDWKNHHSRGRSFGHH 538
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 14 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 134 DYNIQKESTLHLVLRLRGGMQIF 156
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 90 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 210 DYNIQKESTLHLVLRLRGGMQIF 232
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 226 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 286 DYNIQKESTLHLVLRLRGGMQIF 308
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 242 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 301
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 302 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 362 DYNIQKESTLHLVLRLRGGMQIF 384
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 453
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 454 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 514 DYNIQKESTLHLVLRLRGGMQIF 536
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 470 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 529
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 530 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 590 DYNIQKESTLHLVLRLRGGMQIF 612
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 546 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 605
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 606 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 666 DYNIQKESTLHLVLRLRGGMQIF 688
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 681
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 682 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 741
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 742 DYNIQKESTLHLVLRLRGGMQIF 764
Score = 281 bits (688), Expect = 2e-76
Identities = 139/143 (97%), Positives = 139/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 318 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 377
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTL GKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 378 RGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 438 DYNIQKESTLHLVLRLRGGMQIF 460
Score = 275 bits (674), Expect = 1e-74
Identities = 136/139 (97%), Positives = 136/139 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 698 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 757
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 758 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 817
Query: 378 DYNIQKESTLHLVLRLRGG 434
DYNIQKESTLHLVLRLRGG
Sbjct: 818 DYNIQKESTLHLVLRLRGG 836
Score = 159 bits (385), Expect = 1e-39
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 387 IQKESTLHLVLRLRGGMQIF 446
IQKESTLHLVLRLRGGMQIF
Sbjct: 61 IQKESTLHLVLRLRGGMQIF 80
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 14 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 134 DYNIQKESTLHLVLRLRGGMQIF 156
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 90 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 210 DYNIQKESTLHLVLRLRGGMQIF 232
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 226 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 286 DYNIQKESTLHLVLRLRGGMQIF 308
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 242 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 301
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 302 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 362 DYNIQKESTLHLVLRLRGGMQIF 384
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 318 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 377
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 378 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 438 DYNIQKESTLHLVLRLRGGMQIF 460
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 453
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 454 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 514 DYNIQKESTLHLVLRLRGGMQIF 536
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 470 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 529
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 530 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 590 DYNIQKESTLHLVLRLRGGMQIF 612
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 546 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 605
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 606 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 666 DYNIQKESTLHLVLRLRGGMQIF 688
Score = 283 bits (694), Expect = 4e-77
Identities = 140/143 (97%), Positives = 140/143 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 681
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 682 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 741
Query: 378 DYNIQKESTLHLVLRLRGGMQIF 446
DYNIQKESTLHLVLRLRGGMQIF
Sbjct: 742 DYNIQKESTLHLVLRLRGGMQIF 764
Score = 274 bits (671), Expect = 2e-74
Identities = 135/139 (97%), Positives = 136/139 (97%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 698 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 757
Query: 198 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLS 377
RGGMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 758 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 817
Query: 378 DYNIQKESTLHLVLRLRGG 434
DYNIQK+STLHLVLRLRGG
Sbjct: 818 DYNIQKQSTLHLVLRLRGG 836
Score = 159 bits (385), Expect = 1e-39
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 387 IQKESTLHLVLRLRGGMQIF 446
IQKESTLHLVLRLRGGMQIF
Sbjct: 61 IQKESTLHLVLRLRGGMQIF 80
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 151 bits (366), Expect = 2e-37
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 387 IQKESTLHLVLRLRGGM 437
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 128 bits (310), Expect = 1e-30
Identities = 62/64 (96%), Positives = 63/64 (98%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 14 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 198 RGGM 209
RGG+
Sbjct: 74 RGGI 77
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 151 bits (366), Expect = 2e-37
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 387 IQKESTLHLVLRLRGGM 437
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 128 bits (310), Expect = 1e-30
Identities = 62/64 (96%), Positives = 63/64 (98%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 197
T EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 14 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 198 RGGM 209
RGG+
Sbjct: 74 RGGI 77
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 114 bits (275), Expect = 2e-26
Identities = 58/134 (43%), Positives = 86/134 (64%)
Frame = +3
Query: 27 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 206
VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL L + ++
Sbjct: 105 VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRLEVPVKEK 160
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
+ + VKTL GKTI + ++ +DT+E +K +Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 387 IQKESTLHLVLRLR 428
I+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGI 314
M + VKT TGKTIT+E +NVK ++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 100 bits (240), Expect = 4e-22
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
M I VKTLTGK I L++EP+D +E +K +++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 387 IQKESTLHLVLRLRGG 434
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
Score = 83.0 bits (196), Expect = 9e-17
Identities = 35/61 (57%), Positives = 47/61 (77%)
Frame = +3
Query: 24 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 203
++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLVL LRG
Sbjct: 16 DIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRG 75
Query: 204 G 206
G
Sbjct: 76 G 76
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 71.3 bits (167), Expect = 3e-13
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIP 317
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIP 89
T EVEASDTIENVKAKIQDKEGIP
Sbjct: 14 TLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 60.9 bits (141), Expect = 4e-10
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +3
Query: 213 IFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 392
+FVKTL +T+ LEV ++ + ++K I+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 393 KESTLHLVLRLRGG 434
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 56.0 bits (129), Expect = 1e-08
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +3
Query: 24 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 203
EV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E+T+++ L L G
Sbjct: 14 EVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLG 69
Query: 204 G 206
G
Sbjct: 70 G 70
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 60.9 bits (141), Expect = 4e-10
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLSDYNIQKESTLHLV 188
T + ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL D + + STL L
Sbjct: 115 TLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTLRLE 174
Query: 189 LRLRGGMQIFVKTLTGKTITLEV 257
+ + + +FVKT TGKTIT+ +
Sbjct: 175 VSIEKEIDVFVKTYTGKTITISI 197
Score = 54.8 bits (126), Expect = 3e-08
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Frame = +3
Query: 15 GTREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK-QLEDGRTLSDYNIQKESTLHLVL 191
G + +E DT+++VK IQ+ + P + + +E + + N++ T +
Sbjct: 42 GNQIIEMEDTVQDVK--IQEAQQAPLRESEEVTEDPISVESSEVIGNLNVKVAETQQELH 99
Query: 192 RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLE---D 362
G++I+V+ G+T TL+ SDT+ +VKA I +K I P+ Q+L+ L+ D
Sbjct: 100 H--EGIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSD 156
Query: 363 GRTLSDYNIQKESTLHLVLRLRGGMQIF 446
TL D + + STL L + + + +F
Sbjct: 157 HSTLFDNSFENGSTLRLEVSIEKEIDVF 184
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGI 314
M + +KT TGK IT+E S VK ++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 60.9 bits (141), Expect = 4e-10
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +3
Query: 213 IFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 392
+FVKTL +T+ LEV ++ + ++K I+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 393 KESTLHLVLRLRGG 434
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 56.0 bits (129), Expect = 1e-08
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +3
Query: 24 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 203
EV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E+T+++ L L G
Sbjct: 14 EVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLG 69
Query: 204 G 206
G
Sbjct: 70 G 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 56.8 bits (131), Expect = 7e-09
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +3
Query: 210 QIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 389
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 390 QKESTLHLVLR 422
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +3
Query: 24 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 194
++ DT+ ++K I+ + IP L F+GK+LED ++ DYNIQK ST+ + R
Sbjct: 168 KIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 43.2 bits (97), Expect = 9e-05
Identities = 28/72 (38%), Positives = 36/72 (50%)
Frame = +3
Query: 210 QIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 389
Q FV+ L GKT TL V SDT+E K + R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 390 QKESTLHLVLRL 425
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +3
Query: 231 TGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 410
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 411 L 413
L
Sbjct: 241 L 241
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3
Query: 27 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 185
V SDTI VK I + R++ K LED TL+ YNIQ+ STL L
Sbjct: 189 VRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 39.9 bits (89), Expect = 8e-04
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +3
Query: 213 IFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGK 350
+FVKTL +T+ LEV ++ + ++K I+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
Score = 35.1 bits (77), Expect = 0.023
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 24 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 122
EV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 14 EVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +3
Query: 228 LTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 407
+ G + ++ + + +K IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 408 HLVLRLRGG 434
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/60 (26%), Positives = 37/60 (61%)
Frame = +3
Query: 27 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 206
++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L ++ RGG
Sbjct: 593 IQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +3
Query: 228 LTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 407
+ G + ++ + + +K IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 408 HLVLRLRGG 434
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/60 (26%), Positives = 37/60 (61%)
Frame = +3
Query: 27 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 206
++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L ++ RGG
Sbjct: 593 IQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 380
+ + +TLT LE+ TI VKA++ ++G P+ Q+LI+ GK L+D + +
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGE 111
Query: 381 YNIQKESTLHLVLRLR 428
+ ++L R
Sbjct: 112 VGFDSSKFVVVMLSKR 127
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +3
Query: 15 GTREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 179
G V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 174 GKLRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
Score = 36.3 bits (80), Expect = 0.010
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +3
Query: 249 LEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 407
L V SDTI +K I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 36 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 200
SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 249 LEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 428
L V SDTI ++K I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 34.3 bits (75), Expect = 0.041
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
+++ +KTL + T+ + DTI+++ + + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 387 IQKESTLHLVLR 422
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 34.3 bits (75), Expect = 0.041
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
+++ +KTL + T+ + DTI+++ + + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 387 IQKESTLHLVLR 422
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 32.7 bits (71), Expect = 0.13
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +3
Query: 222 KTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 401
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 402 TLHLV 416
+ L+
Sbjct: 73 QIMLL 77
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = +3
Query: 18 TREVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 188
T + + IE++ ++ IP D+ ++F GK+L + D ++ + + L+
Sbjct: 21 TLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPATQIMLL 77
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 32.3 bits (70), Expect = 0.17
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 228 LTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 407
L G I +E++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 24 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 179
E+++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 197 ELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/66 (25%), Positives = 38/66 (57%)
Frame = +3
Query: 225 TLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 404
++ G+ ++ +++E +K I+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 405 LHLVLR 422
+ L++R
Sbjct: 207 VELLVR 212
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +3
Query: 39 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 194
+++E +K KI+ + GIP + L GK L D + L+DY + ++++ L++R
Sbjct: 163 ESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTSVELLVR 212
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 31.5 bits (68), Expect = 0.29
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 201 GGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFA 344
G M +TLTG I + EP + KAI+Q E P + QR++ A
Sbjct: 537 GVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 31.5 bits (68), Expect = 0.29
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 201 GGMQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFA 344
G M +TLTG I + EP + KAI+Q E P + QR++ A
Sbjct: 537 GVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 29.9 bits (64), Expect = 0.88
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQLED 362
+Q+ + + TGK++ + VE + +E + D+EG+ L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +3
Query: 105 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 284
L F G G LSD + + R +G ++ K++ G + LE E ++ ++ +
Sbjct: 409 LPFVGFSYTHGSLLSDARSLTDEIRAIAQRCQGDAELMEKSVDGFMVELENEKAELVQKL 468
Query: 285 K 287
K
Sbjct: 469 K 469
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 24 EVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 185
EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 101 EVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
Score = 27.5 bits (58), Expect = 4.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 333 LIFAGKQLEDGRTLSDYNIQKESTLHL 413
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 27.9 bits (59), Expect = 3.6
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 207 MQIFVKTLTGKTITLEVEPSDTIENVKAIIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 383
M + +KT TGKTIT+E S VK ++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 384 NIQK 395
IQ+
Sbjct: 56 KIQE 59
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 261 PSDTIENVKAIIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 437
P+ T +K + EG P PD + + G QL DG L +I+K + RGG+
Sbjct: 1451 PAGTDYTIKCV---SEGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGL 1507
Query: 438 Q 440
+
Sbjct: 1508 K 1508
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 261 PSDTIENVKAIIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 437
P+ T +K + EG P PD + + G QL DG L +I+K + RGG+
Sbjct: 1514 PAGTDYTIKCV---SEGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGL 1570
Query: 438 Q 440
+
Sbjct: 1571 K 1571
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 261 PSDTIENVKAIIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 437
P+ T +K + EG P PD + + G QL DG L +I+K + RGG+
Sbjct: 1514 PAGTDYTIKCV---SEGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGL 1570
Query: 438 Q 440
+
Sbjct: 1571 K 1571
>Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical
protein F44A6.2 protein.
Length = 534
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 374 KSAPVFELFAGEDKTLLIRRNTF 306
K P F G DK +L+R+N F
Sbjct: 318 KEIPKFNFINGNDKAVLLRKNAF 340
>U23525-7|AAC46569.1| 557|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 1, isoform
a protein.
Length = 557
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -2
Query: 146 KSATVFELFAGKDKTLLIGRNAFFVLNFSFYIFNCVGS 33
+S+ VF++FA L++ N +F+ S Y+F+ +GS
Sbjct: 454 RSSKVFQIFALITSALILSINVYFI---SDYVFSRLGS 488
>U23525-6|AAU05559.1| 471|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 1, isoform
b protein.
Length = 471
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -2
Query: 146 KSATVFELFAGKDKTLLIGRNAFFVLNFSFYIFNCVGS 33
+S+ VF++FA L++ N +F+ S Y+F+ +GS
Sbjct: 368 RSSKVFQIFALITSALILSINVYFI---SDYVFSRLGS 402
>U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone
receptor familymember CNR14 protein.
Length = 534
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 374 KSAPVFELFAGEDKTLLIRRNTF 306
K P F G DK +L+R+N F
Sbjct: 318 KEIPKFNFINGNDKAVLLRKNAF 340
>AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein.
Length = 553
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 374 KSAPVFELFAGEDKTLLIRRNTF 306
K P F G DK +L+R+N F
Sbjct: 315 KEIPKFNFINGNDKAVLLRKNAF 337
>AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein.
Length = 556
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 374 KSAPVFELFAGEDKTLLIRRNTF 306
K P F G DK +L+R+N F
Sbjct: 318 KEIPKFNFINGNDKAVLLRKNAF 340
>AC024800-2|AAF60723.2| 320|Caenorhabditis elegans Serpentine
receptor, class h protein305 protein.
Length = 320
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 155 VVRKSATVFELFAGKDKTLLIGRNAFFVLNFSFYIFNCVGS 33
V+ KS V L + + IG FF L + Y CVGS
Sbjct: 195 VLLKSGEVIPLISTISGFVCIGVQTFFFLFHTIYHLTCVGS 235
>AC024800-1|AAF60725.1| 320|Caenorhabditis elegans Serpentine
receptor, class h protein57 protein.
Length = 320
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 155 VVRKSATVFELFAGKDKTLLIGRNAFFVLNFSFYIFNCVGS 33
V+ KS V L + + IG FF L + Y CVGS
Sbjct: 195 VLLKSGEVIPLISTISGFVCIGVQTFFFLFHTIYHLTCVGS 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,580,100
Number of Sequences: 27780
Number of extensions: 173422
Number of successful extensions: 687
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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