Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_B05
         (447 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    28   0.040
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.12 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.29 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.50 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.50 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   2.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   2.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   4.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.6  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 28.3 bits (60), Expect = 0.040
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -2

Query: 380 IGKSAPVFELFAGEDKT---LLIRRNTFFVLNYSFYIFNC 270
           I  S P+ +   G + T   LLIR  +F +LN++   FNC
Sbjct: 117 ITNSTPLLKKLYGGNSTIIFLLIRFKSFSLLNFNLLFFNC 156



 Score = 24.2 bits (50), Expect = 0.66
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 101 LLIGRNAFFVLNFSFYIFNC 42
           LLI   +F +LNF+   FNC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 36  SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 146
           +DT+   K KI  K  I PD + L+   KQ E G TL
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTL 767



 Score = 23.4 bits (48), Expect = 1.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 264 SDTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTL 374
           +DT+   K  I  K  I PD + L+   KQ E G TL
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTL 767


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 124 NSKTVALFLTTTFKRNPHFTWSYVC 198
           N   +ALF T   K+N   T+ Y+C
Sbjct: 599 NLPKLALFATKDIKQNEEITFDYMC 623


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -2

Query: 95  IGRNAF-FVLNFSFYIFNCVGSLNFP--RAEF 9
           +G N F F+LN ++  F    SLNFP  R EF
Sbjct: 226 VGLNHFYFMLNHNYPPFMLSNSLNFPQIRGEF 257


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -2

Query: 95  IGRNAF-FVLNFSFYIFNCVGSLNFP--RAEF 9
           +G N F F+LN ++  F    SLNFP  R EF
Sbjct: 226 VGLNHFYFMLNHNYPPFMLSNSLNFPQIRGEF 257


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +3

Query: 267  DTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 443
            DT E  K I+Q KEG     Q+  F G  L     + +       T+ ++     G  +
Sbjct: 934  DTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVIAEGPAGRSV 992


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +3

Query: 267  DTIENVKAIIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 443
            DT E  K I+Q KEG     Q+  F G  L     + +       T+ ++     G  +
Sbjct: 930  DTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVIAEGPAGRSV 988


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 110 DKTLLIGRNAFFVLNFSFYIFNCVGSLNFPRAEFLQ 3
           D+T  +G     VLN S+ +   + +  F    FLQ
Sbjct: 327 DETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQ 362


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 201  RADVRPGEVWIPFECCSQKECDRLR 127
            R D+  G+VW+ F  C Q+  D  R
Sbjct: 994  RPDLEYGKVWL-FFGCRQRNLDLYR 1017


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,380
Number of Sequences: 438
Number of extensions: 1841
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)