Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_B04
         (353 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   1.5  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   2.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   2.5  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    22   7.8  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 146 GPPPRSDAASLRCSCSCTDGGSCRSHSRTP 57
           G P  S ++S R S SC +  S  +HS  P
Sbjct: 38  GSPLSSISSSSRNSSSCNNSSSSGTHSDRP 67


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 164 VSVAGHGPPPRSDAASLRCSCSCTDGGS 81
           V +AG  P PR D      + +CT+G S
Sbjct: 379 VDLAGLPPVPRCDEQRPHKATTCTEGKS 406


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 164 VSVAGHGPPPRSDAASLRCS 105
           ++  G GPPP    +  RCS
Sbjct: 761 LNTGGGGPPPDGSGSGSRCS 780


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query: 113 RCSCSCTDG---GSCR 75
           RC+C C DG   G C+
Sbjct: 26  RCTCPCKDGAKEGCCK 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,410
Number of Sequences: 2352
Number of extensions: 5554
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)