Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_B03
         (481 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051510-1|AAK92934.1|  385|Drosophila melanogaster GH16429p pro...   108   3e-24
AE013599-609|AAF59120.2|  385|Drosophila melanogaster CG8707-PA ...   108   3e-24

>AY051510-1|AAK92934.1|  385|Drosophila melanogaster GH16429p
           protein.
          Length = 385

 Score =  108 bits (260), Expect = 3e-24
 Identities = 50/63 (79%), Positives = 54/63 (85%)
 Frame = +1

Query: 292 KKWSFIRCHRNETLCLESTNKIVTDDINNSSFVQFQIWDFPGQIDFFDPTFDSDTIFGGC 471
           +K  F +   NETL LEST+KIV DDINNSSFVQFQIWDFPGQIDFF+PTFDSD IFGGC
Sbjct: 57  QKVVFHKMSPNETLFLESTSKIVKDDINNSSFVQFQIWDFPGQIDFFEPTFDSDMIFGGC 116

Query: 472 GAL 480
           GAL
Sbjct: 117 GAL 119



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = +3

Query: 126 MSYQDDPNCYVGSFPENFSYGPFEQNGDG--DNTSLQDDHKPRILLMGLRRSGKSSIQKV 299
           MSY DD +    +FP++F Y  + Q+G     N +   + KPRILLMG+RRSGKSSIQKV
Sbjct: 1   MSYDDD-DYPADTFPKDFGYRAYNQDGLELEPNATGSSETKPRILLMGMRRSGKSSIQKV 59

Query: 300 VFHKMSPK*NTVF 338
           VFHKMSP   T+F
Sbjct: 60  VFHKMSPN-ETLF 71


>AE013599-609|AAF59120.2|  385|Drosophila melanogaster CG8707-PA
           protein.
          Length = 385

 Score =  108 bits (260), Expect = 3e-24
 Identities = 50/63 (79%), Positives = 54/63 (85%)
 Frame = +1

Query: 292 KKWSFIRCHRNETLCLESTNKIVTDDINNSSFVQFQIWDFPGQIDFFDPTFDSDTIFGGC 471
           +K  F +   NETL LEST+KIV DDINNSSFVQFQIWDFPGQIDFF+PTFDSD IFGGC
Sbjct: 57  QKVVFHKMSPNETLFLESTSKIVKDDINNSSFVQFQIWDFPGQIDFFEPTFDSDMIFGGC 116

Query: 472 GAL 480
           GAL
Sbjct: 117 GAL 119



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = +3

Query: 126 MSYQDDPNCYVGSFPENFSYGPFEQNGDG--DNTSLQDDHKPRILLMGLRRSGKSSIQKV 299
           MSY DD +    +FP++F Y  + Q+G     N +   + KPRILLMG+RRSGKSSIQKV
Sbjct: 1   MSYDDD-DYPADTFPKDFGYRAYNQDGLELEPNATGSSETKPRILLMGMRRSGKSSIQKV 59

Query: 300 VFHKMSPK*NTVF 338
           VFHKMSP   T+F
Sbjct: 60  VFHKMSPN-ETLF 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,584,958
Number of Sequences: 53049
Number of extensions: 400140
Number of successful extensions: 903
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)