Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_A16
(494 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 2.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 4.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.1
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 4.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 5.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 5.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 5.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 7.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.5
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 9.5
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 318 SLDNSIMVNIFIPNNIY 368
SL IM+ IFIP NIY
Sbjct: 406 SLVYIIMLIIFIPRNIY 422
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 4.1
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = +2
Query: 41 FKSIDWQHIYNSWV 82
F+ DW+ +YN ++
Sbjct: 429 FQYTDWEEVYNGYI 442
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 346 IFTIMLLSREETGDYVCME*RP 281
+ +I L+ E +GDY C+ P
Sbjct: 673 LLSITNLAAEHSGDYTCVAANP 694
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 79 GPTGLTGYKPHYQLTRG 129
G LTGY HY+ G
Sbjct: 1430 GGASLTGYTLHYRTAHG 1446
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 4.1
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = +2
Query: 41 FKSIDWQHIYNSWV 82
F+ DW+ +YN ++
Sbjct: 429 FQYTDWEEVYNGYI 442
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 349 KIFTIMLLSREETGDYVCME 290
K FT S+ TG+Y C++
Sbjct: 213 KFFTDYCNSKTNTGEYSCLK 232
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 349 KIFTIMLLSREETGDYVCME 290
K FT S+ TG+Y C++
Sbjct: 213 KFFTDYCNSKTNTGEYSCLK 232
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 79 GPTGLTGYKPHYQLTRG 129
G LTGY HY+ G
Sbjct: 1426 GGASLTGYTLHYRTAHG 1442
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 91 LTGYKPHYQLTRGYVN 138
LT ++ Y+L+RGY++
Sbjct: 765 LTHHEYDYELSRGYID 780
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 176 EFLVSIFFSH 205
E+LVSI FSH
Sbjct: 235 EYLVSIMFSH 244
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.6 bits (41), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 349 LYQIIYISITALPLVFIYKLVI 414
LYQ+ I +P+VFI L I
Sbjct: 205 LYQLSCILFFLIPMVFIAVLYI 226
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 178 IFGFNFFFALC 210
+F FNF FA+C
Sbjct: 12 LFIFNFVFAVC 22
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 216 TCTQCEKKIETKNSAWRNSEPHPYY*VN 133
TC C K + TK + R+ E + +N
Sbjct: 373 TCDVCGKTLSTKLTLKRHKEQQHFQPLN 400
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,334
Number of Sequences: 438
Number of extensions: 3769
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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