Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_A14
(544 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 29 0.040
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 29 0.040
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 29 0.040
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 29 0.040
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 27 0.12
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 26 0.22
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 26 0.22
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 26 0.22
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 26 0.22
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 26 0.22
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 26 0.22
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 26 0.22
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 26 0.22
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 26 0.29
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 25 0.50
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 0.87
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 6.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 6.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 6.1
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 28.7 bits (61), Expect = 0.040
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 286 YQHRINKNSYEN-CSKLIFNFRYI 354
Y++ N N+Y N C KL +N YI
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 28.7 bits (61), Expect = 0.040
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 286 YQHRINKNSYEN-CSKLIFNFRYI 354
Y++ N N+Y N C KL +N YI
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 28.7 bits (61), Expect = 0.040
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 286 YQHRINKNSYEN-CSKLIFNFRYI 354
Y++ N N+Y N C KL +N YI
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 28.7 bits (61), Expect = 0.040
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 286 YQHRINKNSYEN-CSKLIFNFRYI 354
Y++ N N+Y N C KL +N YI
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 220 SKLKNLHIYYNNFKIFRSHSILYQHRINKNSYENCSKLIFNFRYI 354
S L N I+ NN +++ + N N+Y N KL +N YI
Sbjct: 83 SSLSNKTIHNNNNYNNNNYN---NYNYNNNNYNNYKKLYYNINYI 124
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 286 YQHRINKNSYENCSKLIFNFRYI 354
Y + N N+Y N KL +N YI
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 33 NYNQIARNNKYQFMRKCY 86
NYN NN Y +K Y
Sbjct: 93 NYNNYNNNNNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 286 YQHRINKNSYENCSKLIFNFRYI 354
Y + N N+Y N KL +N YI
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 33 NYNQIARNNKYQFMRKCY 86
NYN NN Y +K Y
Sbjct: 93 NYNNYNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 286 YQHRINKNSYENCSKLIFNFRYI 354
Y + N N+Y N KL +N YI
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 33 NYNQIARNNKYQFMRKCY 86
NYN NN Y +K Y
Sbjct: 93 NYNNYNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 286 YQHRINKNSYENCSKLIFNFRYI 354
Y + N N+Y N KL +N YI
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 33 NYNQIARNNKYQFMRKCY 86
NYN NN Y +K Y
Sbjct: 93 NYNNYNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 286 YQHRINKNSYENCSKLIFNFRYI 354
Y + N N+Y N KL +N YI
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 33 NYNQIARNNKYQFMRKCY 86
NYN NN Y +K Y
Sbjct: 93 NYNNYNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 286 YQHRINKNSYENCSKLIFNFRYI 354
Y + N N+Y N KL +N YI
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 33 NYNQIARNNKYQFMRKCY 86
NYN NN Y +K Y
Sbjct: 93 NYNNYNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 286 YQHRINKNSYENCSKLIFNFRYI 354
Y + N N+Y N KL +N YI
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 33 NYNQIARNNKYQFMRKCY 86
NYN NN Y +K Y
Sbjct: 93 NYNNYNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 286 YQHRINKNSYENCSKLIFNFRYI 354
Y + N N+Y N KL +N YI
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 33 NYNQIARNNKYQFMRKCY 86
NYN NN Y +K Y
Sbjct: 93 NYNNYNNNNNYNNYKKLY 110
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.29
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 220 SKLKNLHIYYNN-FKIFRSHSILYQHRINKNSYENCSKLIFN 342
S L N I+ NN +K +++ + N N NC KL +N
Sbjct: 316 SSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYN 357
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.50
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 301 NKNSYENCSKLIFNFRYI 354
N N+Y N KL +N YI
Sbjct: 97 NNNNYNNYKKLYYNINYI 114
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 0.87
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 220 SKLKNLHIYYNNFKIFRSHSILYQHRINKNSYENCSKLIFN 342
S L N I+ NN +++ Y + N N+Y N KL +N
Sbjct: 316 SSLSNKTIHNNNNYNNNNYNNNYNN-YNNNNYNNYKKLYYN 355
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +3
Query: 15 YRNIRKNYNQIARNNKYQFMRKCY 86
Y N NYN NN +K Y
Sbjct: 94 YNNYNNNYNNNYNNNYNNNYKKLY 117
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +3
Query: 15 YRNIRKNYNQIARNNKYQFMRKCY 86
Y N NYN NN +K Y
Sbjct: 94 YNNYNNNYNNNYNNNYNNNYKKLY 117
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 250 NNFKIFRSHSILYQHRINKNSYENCSKLIFNFRYIN 357
NN +F + ++ K + ++L FN Y+N
Sbjct: 29 NNPTLFMIGGVFSNNKSKKYFEQTLNELNFNLNYVN 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,794
Number of Sequences: 438
Number of extensions: 3157
Number of successful extensions: 37
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -