Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_A12
         (530 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open read...    91   3e-18
BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.     91   3e-18
BC030528-1|AAH30528.1|  538|Homo sapiens KIAA1128 protein protein.     30   4.4  
AK097947-1|BAC05201.1|  209|Homo sapiens protein ( Homo sapiens ...    30   4.4  
AK024324-1|BAB14884.1|  701|Homo sapiens protein ( Homo sapiens ...    30   4.4  
BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein.        29   7.7  
BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.        29   7.7  
BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesi...    29   7.7  
AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.                29   7.7  
AK091557-1|BAC03696.1|  775|Homo sapiens protein ( Homo sapiens ...    29   7.7  
AB018259-1|BAA34436.3| 1388|Homo sapiens KIAA0716 protein protein.     29   7.7  

>BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open reading
           frame 28 protein.
          Length = 480

 Score = 90.6 bits (215), Expect = 3e-18
 Identities = 45/116 (38%), Positives = 70/116 (60%)
 Frame = +3

Query: 12  LAAVPLALYIGSLMAAGVQRLAPRSCTRKLTYFMGSICALSGFVWIYLGTDEDYKSYYIY 191
           +A +PL +Y+   +++ + +   +   R +TYF G +  L+   W+ L    +     +Y
Sbjct: 313 IATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLVILAFAAWVALA---EGLGVAVY 369

Query: 192 LVAILIGYGGAIMLVTSLAMTADLIGTKTEASAFVYGLMSFTDKLSCGFAIAIVQT 359
             A+L+G G A +LVTSLAMTADLIG  T + AFVYG MSF DK++ G A+  +Q+
Sbjct: 370 AAAVLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSMSFLDKVANGLAVMAIQS 425


>BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.
          Length = 471

 Score = 90.6 bits (215), Expect = 3e-18
 Identities = 45/116 (38%), Positives = 70/116 (60%)
 Frame = +3

Query: 12  LAAVPLALYIGSLMAAGVQRLAPRSCTRKLTYFMGSICALSGFVWIYLGTDEDYKSYYIY 191
           +A +PL +Y+   +++ + +   +   R +TYF G +  L+   W+ L    +     +Y
Sbjct: 304 IATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLVILAFAAWVALA---EGLGVAVY 360

Query: 192 LVAILIGYGGAIMLVTSLAMTADLIGTKTEASAFVYGLMSFTDKLSCGFAIAIVQT 359
             A+L+G G A +LVTSLAMTADLIG  T + AFVYG MSF DK++ G A+  +Q+
Sbjct: 361 AAAVLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSMSFLDKVANGLAVMAIQS 416


>BC030528-1|AAH30528.1|  538|Homo sapiens KIAA1128 protein protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -2

Query: 394 SR*YVDSAPSAYVCTMAIANPHE-SLSVKLIRPYTNAEASVLVPIRSAVIAK 242
           S+ +  S  ++++   +I   H  + +V L +PY N + S+ VP+RS+++ +
Sbjct: 192 SQSFSHSIQNSFLPPSSITRSHSFNRAVDLTKPYQNQQLSIRVPLRSSMLTR 243


>AK097947-1|BAC05201.1|  209|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40628 fis, clone THYMU2014204, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN. ).
          Length = 209

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 379 DSAPSAYVCTMAIANPHESLSVKLIR-PYTNAEASVLVPIRSAVIAKLVTSMIAP 218
           D  P   VC      P +SL V  +R P+ +    +L  IR  V  K V   + P
Sbjct: 108 DDQPRPLVCESPAERPRDSLEVPAVRPPHASINEHILAAIRQGVKLKKVHPDLGP 162


>AK024324-1|BAB14884.1|  701|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14262 fis, clone PLACE1001608. ).
          Length = 701

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -2

Query: 394 SR*YVDSAPSAYVCTMAIANPHE-SLSVKLIRPYTNAEASVLVPIRSAVIAK 242
           S+ +  S  ++++   +I   H  + +V L +PY N + S+ VP+RS+++ +
Sbjct: 192 SQSFSHSIQNSFLPPSSITRSHSFNRAVDLTKPYQNQQLSIRVPLRSSMLTR 243


>BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein.
          Length = 1106

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 454 YRNSDQTMLLLMMILQSTHLHLQQQ 528
           Y N D   +LL ++L   H+HLQ+Q
Sbjct: 821 YTNPDSRYILLPVVLHHLHIHLQEQ 845


>BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.
          Length = 2011

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 454 YRNSDQTMLLLMMILQSTHLHLQQQ 528
           Y N D   +LL ++L   H+HLQ+Q
Sbjct: 821 YTNPDSRYILLPVVLHHLHIHLQEQ 845


>BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesis 4
           protein.
          Length = 1966

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 454 YRNSDQTMLLLMMILQSTHLHLQQQ 528
           Y N D   +LL ++L   H+HLQ+Q
Sbjct: 821 YTNPDSRYILLPVVLHHLHIHLQEQ 845


>AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.
          Length = 1966

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 454 YRNSDQTMLLLMMILQSTHLHLQQQ 528
           Y N D   +LL ++L   H+HLQ+Q
Sbjct: 821 YTNPDSRYILLPVVLHHLHIHLQEQ 845


>AK091557-1|BAC03696.1|  775|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34238 fis, clone FCBBF3027559, weakly similar to
           Dedicator of cyto-kinesis 1. ).
          Length = 775

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 454 YRNSDQTMLLLMMILQSTHLHLQQQ 528
           Y N D   +LL ++L   H+HLQ+Q
Sbjct: 161 YTNPDSRYILLPVVLHHLHIHLQEQ 185


>AB018259-1|BAA34436.3| 1388|Homo sapiens KIAA0716 protein protein.
          Length = 1388

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 454 YRNSDQTMLLLMMILQSTHLHLQQQ 528
           Y N D   +LL ++L   H+HLQ+Q
Sbjct: 272 YTNPDSRYILLPVVLHHLHIHLQEQ 296


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,079,452
Number of Sequences: 237096
Number of extensions: 1638210
Number of successful extensions: 2628
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2626
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)