Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_A10
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   1.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   5.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.8  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 231 FVHWNSKAVGLLYVFETVHYLPLYDEV 311
           F  W S  VG++  F T   +PL D++
Sbjct: 306 FRAWESIIVGMIGAFITCFTMPLLDKM 332


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 305 IVQREIVHGLKYVQKTYRLGVP 240
           I++   + G  YV+  Y LG+P
Sbjct: 283 IMELHNIEGTHYVKIVYYLGIP 304


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 305 IVQREIVHGLKYVQKTYRLGVP 240
           I++   + G  YV+  Y LG+P
Sbjct: 298 IMELHNIEGTHYVKIVYYLGIP 319


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = +3

Query: 270 VFETVHYLPLYDEVDPYPVLDTLLYHEHLFFEVGQ 374
           + +  + L L +  D +  L    Y E+  +E+G+
Sbjct: 382 LMDETNQLTLQETADAFKDLQDKYYEEYKMYELGE 416


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 278 LKYVQKTYRLGVPVD 234
           +K ++K YRL  P+D
Sbjct: 848 IKSIEKGYRLPAPMD 862


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 273 IRTEDLPPWSSSGQNDPYGWFVPP*NGDPVVHDAPRGC 160
           IR E++     + QN  Y     P NG  +  D P GC
Sbjct: 398 IRVENIIDLEGAPQNFYYIEEYLPGNGVIIPDDPPIGC 435


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,715
Number of Sequences: 438
Number of extensions: 2533
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)