Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_A08
         (549 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   4.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   4.7  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   6.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.2  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 296 SVRPVDQHCVLGDVQYAAGAQALNRRCRCVHH 201
           ++R +D   + G V    GA  L  RC  VHH
Sbjct: 47  TLRVLDPGAITGLVASLDGALKLRIRCSDVHH 78


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
 Frame = +2

Query: 122  IKMTSTPFNVGLSDSARVSSRVLRPPGGGHTDIFGSEPEPPQRTG--------RRQVHNA 277
            + ++ +P + G +D    S R+  PP        GS  E   R           R+VHN 
Sbjct: 1375 VDLSPSPSDRGRNDDG--SDRLTSPPTPLSISRAGSRDEDSTRDSTKLDRSSREREVHNG 1432

Query: 278  GQRDEQKPPTNGTDAPTSNGQNTLSETPHPAEVKQ 382
            GQ++++   T  T AP    Q    +     + +Q
Sbjct: 1433 GQQEDRDRKTL-TSAPQQPQQQQQQQQQQQQQQQQ 1466



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +2

Query: 230  EPEPPQRTGRRQVHNAGQRDEQKPPTNGTDAPTSNGQNTLSETPHPAEVKQ 382
            + +  Q+  ++Q H A +R+        T A TSN +     +  P +V +
Sbjct: 1221 QQQQQQQQQQQQQHQAREREGVGAGIAETSAGTSNSRGAAQMSKVPRDVSE 1271


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = +2

Query: 203 GGHTDIFGSEPEPPQRTGRRQVHNAGQRDEQKP 301
           G +  ++ S+P PP    RR+     +    +P
Sbjct: 98  GNNRPVYISQPRPPHPRLRREAEPEAEPGNNRP 130



 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = +2

Query: 203 GGHTDIFGSEPEPPQRTGRRQVHNAGQRDEQKP 301
           G +  ++ S+P PP    RR+     +    +P
Sbjct: 154 GNNRPVYISQPRPPHPRLRREAEPEAEPGNNRP 186


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +2

Query: 308 NGTDAPTSNGQNTLSETPHPAEVKQDSSPKVEQAPPAANM 427
           N  D     G       P P EV  D  P+ +  PP+A +
Sbjct: 268 NNGDMFCHTGLGHYGHHPDPGEV--DLPPETQPTPPSATL 305


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = +2

Query: 203 GGHTDIFGSEPEPPQRTGRRQVHNAGQRDEQKP 301
           G +  I+  +P PP    RR+  +  +    +P
Sbjct: 71  GNNRPIYIPQPRPPHPRLRREAESEAEPGNNRP 103


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +3

Query: 195 PLVVDTPTSSVQSLSPRSVLDVAKYTMLVNGTNRNRQPM 311
           P +   P+SS  S  P      A      NG   N+Q +
Sbjct: 515 PRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQEL 553


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,272
Number of Sequences: 438
Number of extensions: 3953
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)