Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_A05
(411 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 24 0.77
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 5.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 5.4
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 5.4
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 7.2
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 7.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 7.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.2
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 7.2
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 20 9.5
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 9.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 20 9.5
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 20 9.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 9.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 9.5
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 20 9.5
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.8 bits (49), Expect = 0.77
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 117 NAFEILAS*EGYVDLFDHLDAGNIFAKAVLLSGC 16
+AFE L E +VD+ D ++ A V+LS C
Sbjct: 20 SAFENLRDDEDFVDVTLACDGRSLKAHRVVLSAC 53
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 127 HNNNEQHHYRKIFNLPIAN 183
+NNN ++Y+K++ I N
Sbjct: 105 YNNNYNNNYKKLYKNYIIN 123
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 127 HNNNEQHHYRKIFNLPIAN 183
+NNN ++Y+K++ I N
Sbjct: 105 YNNNYNNNYKKLYKNYIIN 123
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.0 bits (42), Expect = 5.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 408 VILTITCNKLYIESRAH 358
V++ ITC K +SR H
Sbjct: 58 VLILITCRKRVSKSRIH 74
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.6 bits (41), Expect = 7.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 183 FTSDIYFVSWDIVIVNVYFFYLYID 257
F D Y S IV+++ F+L++D
Sbjct: 234 FMMDYYIPSILIVVISWVSFWLHMD 258
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.2
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = +1
Query: 124 WHNNNEQHHYRKIF 165
++NNN ++Y+K++
Sbjct: 97 YNNNNNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 7.2
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = +1
Query: 124 WHNNNEQHHYRKIF 165
++NNN ++Y+K++
Sbjct: 97 YNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.2
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = +1
Query: 124 WHNNNEQHHYRKIF 165
++NNN ++Y+K++
Sbjct: 97 YNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.2
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = +1
Query: 124 WHNNNEQHHYRKIF 165
++NNN ++Y+K++
Sbjct: 97 YNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.2
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = +1
Query: 124 WHNNNEQHHYRKIF 165
++NNN ++Y+K++
Sbjct: 97 YNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.2
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = +1
Query: 124 WHNNNEQHHYRKIF 165
++NNN ++Y+K++
Sbjct: 97 YNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.2
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = +1
Query: 124 WHNNNEQHHYRKIF 165
++NNN ++Y+K++
Sbjct: 97 YNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 7.2
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = +1
Query: 124 WHNNNEQHHYRKIF 165
++NNN ++Y+K++
Sbjct: 97 YNNNNNYNNYKKLY 110
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 20.6 bits (41), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 2 HEDSTQPLSRTALAKMLPA 58
H DS Q SR ++ KML A
Sbjct: 256 HGDSRQIQSRKSVIKMLSA 274
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 20.2 bits (40), Expect = 9.5
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 283 YYEIYPPRRSI 251
Y+E+ PP R+I
Sbjct: 80 YFELLPPNRTI 90
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.5
Identities = 5/13 (38%), Positives = 11/13 (84%)
Frame = +1
Query: 127 HNNNEQHHYRKIF 165
+NNN ++Y+K++
Sbjct: 96 YNNNNYNNYKKLY 108
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.2 bits (40), Expect = 9.5
Identities = 5/13 (38%), Positives = 11/13 (84%)
Frame = +1
Query: 127 HNNNEQHHYRKIF 165
+NNN ++Y+K++
Sbjct: 106 YNNNNYNNYKKLY 118
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 20.2 bits (40), Expect = 9.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 353 DLCARDSMYSLLQVIVKIT 409
D+C +YSLL +I+ T
Sbjct: 90 DICWITMVYSLLGIIIAYT 108
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 9.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2
Query: 245 VEKIYINNHYI 213
VE ++INN+YI
Sbjct: 619 VELLFINNNYI 629
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 9.5
Identities = 5/13 (38%), Positives = 11/13 (84%)
Frame = +1
Query: 127 HNNNEQHHYRKIF 165
+NNN ++Y+K++
Sbjct: 341 YNNNNYNNYKKLY 353
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 20.2 bits (40), Expect = 9.5
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 283 YYEIYPPRRSI 251
Y+E+ PP R+I
Sbjct: 201 YFELLPPNRTI 211
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,825
Number of Sequences: 438
Number of extensions: 2550
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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