Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P22
(573 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07956-1|AAA58642.1| 702|Homo sapiens 1,4-alpha-glucan branchin... 295 7e-80
BC012098-1|AAH12098.1| 702|Homo sapiens glucan (1,4-alpha-), br... 295 7e-80
AB209731-1|BAD92968.1| 754|Homo sapiens Glucan , branching enzy... 295 7e-80
J05556-1|AAA88021.1| 467|Homo sapiens neutrophil collagenase pr... 33 0.71
DQ141306-1|AAZ38714.1| 467|Homo sapiens matrix metalloproteinas... 33 0.71
BC074989-1|AAH74989.1| 467|Homo sapiens matrix metallopeptidase... 33 0.71
BC074988-1|AAH74988.1| 467|Homo sapiens matrix metallopeptidase... 33 0.71
AF426260-1|AAM53516.1| 178|Homo sapiens putative C21orf83B prot... 29 8.8
AF426259-1|AAM53515.1| 178|Homo sapiens putative C21orf83B prot... 29 8.8
AC017035-2|AAY15060.1| 394|Homo sapiens unknown protein. 29 8.8
>L07956-1|AAA58642.1| 702|Homo sapiens 1,4-alpha-glucan branching
enzyme protein.
Length = 702
Score = 295 bits (724), Expect = 7e-80
Identities = 130/188 (69%), Positives = 158/188 (84%)
Frame = +1
Query: 10 EVLRFLLSNLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSGHYDEYYGLNVDTEALVY 189
EVLRFLLSN+RW+ EEY+FDGFRFDGVTSMLYH G+G+GFSG Y EY+GL VD +AL Y
Sbjct: 333 EVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFGLQVDEDALTY 392
Query: 190 LMLANEITHNIDGRAITIAEDVSGMPASCRPVKEGGTGFDYRLGMAIPDMWIKLLKEERD 369
LMLAN + H + +ITIAEDVSGMPA C P+ +GG GFDYRL MAIPD WI+LLKE +D
Sbjct: 393 LMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKD 452
Query: 370 EDWKIGHIVHTLTNRRWMEGTIAYAESHDQALVGDKTIAFWLMDATMYSHMSTISEPSPV 549
EDW +G IV+TLTNRR++E IAYAESHDQALVGDK++AFWLMDA MY++MS ++ +PV
Sbjct: 453 EDWNMGDIVYTLTNRRYLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPV 512
Query: 550 VERGLALH 573
++RG+ LH
Sbjct: 513 IDRGIQLH 520
>BC012098-1|AAH12098.1| 702|Homo sapiens glucan (1,4-alpha-),
branching enzyme 1 (glycogen branching enzyme, Andersen
di protein.
Length = 702
Score = 295 bits (724), Expect = 7e-80
Identities = 130/188 (69%), Positives = 158/188 (84%)
Frame = +1
Query: 10 EVLRFLLSNLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSGHYDEYYGLNVDTEALVY 189
EVLRFLLSN+RW+ EEY+FDGFRFDGVTSMLYH G+G+GFSG Y EY+GL VD +AL Y
Sbjct: 333 EVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFGLQVDEDALTY 392
Query: 190 LMLANEITHNIDGRAITIAEDVSGMPASCRPVKEGGTGFDYRLGMAIPDMWIKLLKEERD 369
LMLAN + H + +ITIAEDVSGMPA C P+ +GG GFDYRL MAIPD WI+LLKE +D
Sbjct: 393 LMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKD 452
Query: 370 EDWKIGHIVHTLTNRRWMEGTIAYAESHDQALVGDKTIAFWLMDATMYSHMSTISEPSPV 549
EDW +G IV+TLTNRR++E IAYAESHDQALVGDK++AFWLMDA MY++MS ++ +PV
Sbjct: 453 EDWNMGDIVYTLTNRRYLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPV 512
Query: 550 VERGLALH 573
++RG+ LH
Sbjct: 513 IDRGIQLH 520
>AB209731-1|BAD92968.1| 754|Homo sapiens Glucan , branching enzyme
1 variant protein.
Length = 754
Score = 295 bits (724), Expect = 7e-80
Identities = 130/188 (69%), Positives = 158/188 (84%)
Frame = +1
Query: 10 EVLRFLLSNLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSGHYDEYYGLNVDTEALVY 189
EVLRFLLSN+RW+ EEY+FDGFRFDGVTSMLYH G+G+GFSG Y EY+GL VD +AL Y
Sbjct: 385 EVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFGLQVDEDALTY 444
Query: 190 LMLANEITHNIDGRAITIAEDVSGMPASCRPVKEGGTGFDYRLGMAIPDMWIKLLKEERD 369
LMLAN + H + +ITIAEDVSGMPA C P+ +GG GFDYRL MAIPD WI+LLKE +D
Sbjct: 445 LMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKD 504
Query: 370 EDWKIGHIVHTLTNRRWMEGTIAYAESHDQALVGDKTIAFWLMDATMYSHMSTISEPSPV 549
EDW +G IV+TLTNRR++E IAYAESHDQALVGDK++AFWLMDA MY++MS ++ +PV
Sbjct: 505 EDWNMGDIVYTLTNRRYLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPV 564
Query: 550 VERGLALH 573
++RG+ LH
Sbjct: 565 IDRGIQLH 572
>J05556-1|AAA88021.1| 467|Homo sapiens neutrophil collagenase
protein.
Length = 467
Score = 33.1 bits (72), Expect = 0.71
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 34 NLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSG--HYD-EYYGLNVDTEALVYLMLAN 204
N+ +YQ ++ D FDG +L H+ G+G G H+D E N ++L+ A+
Sbjct: 159 NIAFYQRDHG-DNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 205 EITHNI 222
E H++
Sbjct: 218 EFGHSL 223
>DQ141306-1|AAZ38714.1| 467|Homo sapiens matrix metalloproteinase 8
(neutrophil collagenase) protein.
Length = 467
Score = 33.1 bits (72), Expect = 0.71
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 34 NLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSG--HYD-EYYGLNVDTEALVYLMLAN 204
N+ +YQ ++ D FDG +L H+ G+G G H+D E N ++L+ A+
Sbjct: 159 NIAFYQRDHG-DNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 205 EITHNI 222
E H++
Sbjct: 218 EFGHSL 223
>BC074989-1|AAH74989.1| 467|Homo sapiens matrix metallopeptidase 8
(neutrophil collagenase) protein.
Length = 467
Score = 33.1 bits (72), Expect = 0.71
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 34 NLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSG--HYD-EYYGLNVDTEALVYLMLAN 204
N+ +YQ ++ D FDG +L H+ G+G G H+D E N ++L+ A+
Sbjct: 159 NIAFYQRDHG-DNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 205 EITHNI 222
E H++
Sbjct: 218 EFGHSL 223
>BC074988-1|AAH74988.1| 467|Homo sapiens matrix metallopeptidase 8
(neutrophil collagenase) protein.
Length = 467
Score = 33.1 bits (72), Expect = 0.71
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 34 NLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSG--HYD-EYYGLNVDTEALVYLMLAN 204
N+ +YQ ++ D FDG +L H+ G+G G H+D E N ++L+ A+
Sbjct: 159 NIAFYQRDHG-DNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 205 EITHNI 222
E H++
Sbjct: 218 EFGHSL 223
>AF426260-1|AAM53516.1| 178|Homo sapiens putative C21orf83B protein
form B protein.
Length = 178
Score = 29.5 bits (63), Expect = 8.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 400 CVRCDRSSSPRRVPLSAALSTCRVWPCLAGNRTPYRP 290
C C ++ R VP +A+L C W C G+ RP
Sbjct: 109 CESCGEATGKRSVPSAASL--CPAWDCAGGSGVEGRP 143
>AF426259-1|AAM53515.1| 178|Homo sapiens putative C21orf83B protein
form A protein.
Length = 178
Score = 29.5 bits (63), Expect = 8.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 400 CVRCDRSSSPRRVPLSAALSTCRVWPCLAGNRTPYRP 290
C C ++ R VP +A+L C W C G+ RP
Sbjct: 109 CESCGEATGKRSVPSAASL--CPAWDCAGGSGVEGRP 143
>AC017035-2|AAY15060.1| 394|Homo sapiens unknown protein.
Length = 394
Score = 29.5 bits (63), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 285 ERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDR-SHRTHSHQQEMDGGNHCVR 443
E+GR + L A GHT V+ +G ++D + RT H ++G C+R
Sbjct: 48 EKGRTALDLAAFKGHTECVEALINQGASIFVKDNVTKRTPLHASVINGHTLCLR 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,386,500
Number of Sequences: 237096
Number of extensions: 2029654
Number of successful extensions: 4674
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4667
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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